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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
36
chromatin state
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
98
September, 2022
46
February, 2021
5
May, 2021
3
August, 2017
3
February, 2024
3
November, 2021
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
127
bed bed3+
33
bed bed9
2
tsv
Organism
164
Homo sapiens
Biosample type
131
tissue
30
cell line
3
primary cell
Organ
723
epithelium
586
kidney
407
brain
361
connective tissue
342
musculature of body
296
lung
268
intestine
217
heart
214
limb
214
vasculature
208
pancreas
206
bodily fluid
203
embryo
195
blood
191
skin of body
166
blood vessel
164
large intestine
137
extraembryonic component
129
liver
111
stomach
81
small intestine
80
mammary gland
80
uterus
79
adipose tissue
73
bone element
73
prostate gland
69
placenta
66
adrenal gland
61
penis
59
artery
57
ureter
54
lymph node
48
eye
46
thymus
45
gonad
41
esophagus
41
spinal cord
32
spleen
24
testis
22
lymphoid tissue
21
ovary
21
thyroid gland
20
vein
19
nerve
18
mouth
17
lymphatic vessel
13
bronchus
13
pituitary gland
12
breast
10
bone marrow
10
skeleton
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
161
AMP
3
ENCODE
Genome assembly (visualization)
160
hg19
40
GRCh38
annotation_type!
accessible chromatin
month_released!
May, 2020
October, 2019
BIOSAMPLE
TYPE
164 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
27
14
13
1
sigmoid colon
10
7
5
transverse colon
8
5
4
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 7 more…
cell line
HT-29
2
2
1
1
1
HCT116
2
3
1
SW480
2
1
1
1
1
HCT-116 cell
1
2
RKO
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
See all biosamples
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