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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1016
candidate regulatory elements
583
target gene predictions
555
chromatin state
accessible chromatin
183
gene expression
183
histone modifications
115
eQTL
74
Fine-mapped variants
74
binding sites
54
variant allelic effects
5
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
sQTL
1
other
1
representative DNase hypersensitivity sites
Date released
1481
September, 2022
822
February, 2021
114
March, 2020
64
May, 2021
60
August, 2021
60
May, 2020
56
January, 2022
48
February, 2020
40
February, 2024
27
March, 2024
23
August, 2017
22
January, 2020
9
May, 2019
8
April, 2019
6
March, 2023
4
September, 2023
3
October, 2019
2
January, 2018
1
August, 2020
1
August, 2022
1
February, 2023
1
May, 2022
1
November, 2019
Available data
1938
bed bed3+
526
bed bed9
286
tsv
36
bigBed bed9
24
csv
2
bigWig
1
bam
Organism
2853
Homo sapiens
Biosample type
2454
tissue
2187
cell line
1969
primary cell
401
in vitro differentiated cells
4
stem cell
Organ
329
brain
300
musculature of body
280
kidney
226
intestine
217
limb
198
heart
179
lung
131
large intestine
125
connective tissue
105
stomach
100
extraembryonic component
97
pancreas
79
adipose tissue
79
small intestine
77
vasculature
76
blood vessel
63
embryo
61
adrenal gland
61
liver
60
ureter
59
placenta
47
thymus
46
epithelium
37
gonad
36
artery
35
spinal cord
33
esophagus
32
spleen
30
skin of body
26
eye
22
nerve
20
ovary
19
thyroid gland
17
lymphoid tissue
17
testis
14
bone element
14
prostate gland
12
breast
12
uterus
10
mouth
10
skeleton
10
vagina
9
tongue
9
urinary bladder
6
penis
4
bodily fluid
4
mammary gland
3
blood
3
nose
3
pituitary gland
1
lymphatic vessel
vein
Project
2850
AMP
5
ITG
Genome assembly (visualization)
2586
hg19
693
GRCh38
3
hg18
annotation_type!
accessible chromatin
organ_slims!
vein
BIOSAMPLE
TYPE
2855 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
gene expression
histone modifications
eQTL
Fine-mapped variants
binding sites
variant allelic effects
differential activity
variant to gene
pQTL
caQTL
sQTL
other
representative DNase hypersensitivity sites
tissue
heart
37
20
21
3
1
1
2
stomach
40
21
19
1
1
1
brain
29
16
18
1
3
2
1
1
kidney
29
14
16
7
2
1
1
1
lung
33
17
16
1
1
+ See 237 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
10
1
1
1
neural progenitor cell
5
5
4
7
15
adipocyte
4
6
6
1
1
1
cardiomyocytes
11
mesenchymal stem cell
3
3
2
1
1
+ See 109 more…
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