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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
accessible chromatin
121
target gene predictions
104
candidate regulatory elements
93
gene expression
65
chromatin state
41
differential activity
36
binding sites
36
eQTL
31
histone modifications
27
variant allelic effects
11
Fine-mapped variants
2
caQTL
2
pQTL
2
sQTL
2
variant to gene
Date released
160
September, 2022
139
February, 2021
47
March, 2023
39
May, 2021
25
November, 2021
22
February, 2024
19
August, 2021
18
March, 2020
17
September, 2023
14
May, 2020
12
October, 2022
11
February, 2020
10
August, 2017
10
January, 2021
10
January, 2022
7
August, 2018
3
January, 2020
2
February, 2023
2
January, 2018
2
May, 2024
1
April, 2019
1
November, 2020
1
October, 2019
Available data
337
bed bed3+
132
tsv
54
bed bed9
7
bigBed narrowPeak
7
bigWig
7
txt
4
bigBed bed9
3
csv
Organism
573
Homo sapiens
Biosample type
299
primary cell
181
tissue
51
cell line
41
in vitro differentiated cells
1
stem cell
Organ
737
epithelium
602
kidney
424
brain
372
connective tissue
348
musculature of body
296
lung
268
intestine
230
vasculature
229
heart
224
limb
212
pancreas
206
bodily fluid
203
embryo
195
blood
191
skin of body
178
blood vessel
164
large intestine
137
extraembryonic component
132
liver
111
stomach
82
adipose tissue
81
small intestine
80
mammary gland
80
uterus
74
bone element
73
prostate gland
69
placenta
66
adrenal gland
64
artery
61
penis
60
ureter
54
lymph node
50
eye
47
thymus
45
gonad
41
esophagus
41
spinal cord
32
spleen
24
testis
22
lymphoid tissue
22
nerve
21
ovary
21
thyroid gland
21
vein
18
mouth
17
lymphatic vessel
13
bronchus
13
pituitary gland
12
breast
11
bone marrow
10
skeleton
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
515
AMP
25
ENCODE
15
KPMP
10
T1D
4
ITG
4
community
Genome assembly (visualization)
419
hg19
102
GRCh38
2
hg18
annotation_type!
accessible chromatin
BIOSAMPLE
TYPE
573 results
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Clear Filters
target gene predictions
candidate regulatory elements
gene expression
chromatin state
differential activity
binding sites
eQTL
histone modifications
variant allelic effects
Fine-mapped variants
caQTL
pQTL
sQTL
variant to gene
primary cell
fibroblast of lung
4
6
4
2
foreskin fibroblast
2
6
1
4
2
fibroblast
4
1
2
6
pancreatic ductal cell
3
3
3
1
2
1
fibroblast of dermis
4
4
3
1
+ See 54 more…
tissue
islet of Langerhans
1
11
3
2
13
1
1
2
2
2
adipose tissue
8
7
3
6
1
4
1
body of pancreas
5
8
2
4
1
1
3
subcutaneous adipose tissue
2
5
1
1
6
1
3
pancreas
5
5
3
1
1
1
1
+ See 9 more…
cell line
EndoC_BH1
1
8
3
1
GM23248
1
2
1
1
1
Panc1
2
2
1
HT1080
1
2
1
8988T
1
1
1
+ See 10 more…
in vitro differentiated cells
adipocyte
6
4
1
6
1
1
mesenchymal stem cell
3
3
2
1
1
pancreatic ductal cell
3
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 6 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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