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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
226
gene expression
182
candidate regulatory elements
96
target gene predictions
94
chromatin state
accessible chromatin
60
differential activity
20
binding sites
20
histone modifications
20
variant allelic effects
12
eQTL
3
Fine-mapped variants
1
caQTL
Date released
271
September, 2022
213
February, 2021
140
September, 2023
23
August, 2021
21
February, 2024
19
May, 2020
13
March, 2020
11
February, 2020
4
March, 2023
3
August, 2017
3
May, 2021
3
October, 2022
2
January, 2022
2
March, 2024
1
April, 2019
1
January, 2020
1
July, 2020
1
May, 2019
1
May, 2022
1
November, 2021
Available data
337
bed bed3+
279
tsv
91
bed bed9
87
txt
10
bigWig
3
bigBed bed9
3
csv
1
bam
Organism
734
Homo sapiens
Biosample type
334
tissue
332
primary cell
61
cell line
7
in vitro differentiated cells
Organ
737
epithelium
602
kidney
424
brain
370
connective tissue
348
musculature of body
296
lung
268
intestine
230
vasculature
229
heart
224
limb
212
pancreas
206
bodily fluid
203
embryo
195
blood
191
skin of body
178
blood vessel
164
large intestine
137
extraembryonic component
132
liver
111
stomach
82
adipose tissue
81
small intestine
80
mammary gland
80
uterus
74
bone element
73
prostate gland
69
placenta
66
adrenal gland
64
artery
61
penis
60
ureter
54
lymph node
50
eye
47
thymus
45
gonad
41
esophagus
41
spinal cord
32
spleen
24
testis
22
lymphoid tissue
22
nerve
21
ovary
21
thyroid gland
21
vein
18
mouth
17
lymphatic vessel
13
bronchus
13
pituitary gland
12
breast
11
bone marrow
10
skeleton
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
593
AMP
140
KPMP
1
ENCODE
Genome assembly (visualization)
438
hg19
120
GRCh38
2
hg18
annotation_type!
accessible chromatin
BIOSAMPLE
TYPE
734 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
chromatin state
differential activity
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
tissue
kidney
7
29
14
16
1
2
1
1
liver
1
13
10
9
1
1
2
7
1
right kidney
20
10
10
1
renal cortex interstitium
20
9
9
1
renal pelvis
19
9
9
1
+ See 15 more…
primary cell
hepatocyte
13
1
3
1
1
4
2
epithelial cell of proximal tubule
16
2
1
1
1
1
glomerular endothelial cell
14
2
1
1
1
endothelial cell of hepatic sinusoid
4
6
glomerular visceral epithelial cell
5
2
1
1
+ See 62 more…
cell line
HepG2
2
3
2
3
5
HEK293
3
1
1
2
1
HuH-7
1
1
1
1
1
ACHN
2
1
1
Caki2
2
1
1
+ See 11 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
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