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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
116
candidate regulatory elements
101
target gene predictions
63
chromatin state
52
binding sites
30
histone modifications
accessible chromatin
4
eQTL
3
gene expression
1
pQTL
Date released
173
September, 2022
120
February, 2021
31
February, 2024
20
October, 2022
9
May, 2021
5
August, 2017
3
August, 2021
3
March, 2024
3
November, 2021
2
January, 2022
1
March, 2020
Available data
305
bed bed3+
58
bed bed9
3
tsv
Organism
370
Homo sapiens
Biosample type
224
cell line
135
tissue
11
primary cell
Organ
737
epithelium
602
kidney
424
brain
370
connective tissue
348
musculature of body
296
lung
268
intestine
230
vasculature
229
heart
224
limb
212
pancreas
206
bodily fluid
203
embryo
195
blood
191
skin of body
178
blood vessel
164
large intestine
137
extraembryonic component
132
liver
111
stomach
82
adipose tissue
81
small intestine
80
mammary gland
80
uterus
74
bone element
73
prostate gland
69
placenta
66
adrenal gland
64
artery
61
penis
60
ureter
54
lymph node
50
eye
47
thymus
45
gonad
41
esophagus
41
spinal cord
32
spleen
24
testis
22
lymphoid tissue
22
nerve
21
ovary
21
thyroid gland
21
vein
18
mouth
17
lymphatic vessel
13
bronchus
13
pituitary gland
12
breast
11
bone marrow
10
skeleton
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
367
AMP
3
ENCODE
Genome assembly (visualization)
365
hg19
93
GRCh38
annotation_type!
accessible chromatin
BIOSAMPLE
TYPE
370 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
eQTL
gene expression
pQTL
cell line
K562
7
23
7
2
1
GM12878
2
8
2
2
1
GM06990
2
1
1
2
1
GM12875
2
1
1
2
1
GM19238
1
2
1
2
1
+ See 34 more…
tissue
large intestine
27
14
13
1
sigmoid colon
10
7
5
transverse colon
8
5
4
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 10 more…
primary cell
peripheral blood mononuclear cell
4
1
1
colon epithelial cell
3
peripheral blood stem cell
1
1
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