Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
27
candidate regulatory elements
15
target gene predictions
13
chromatin state
8
binding sites
7
histone modifications
accessible chromatin
1
gene expression
variant allelic effects
Date released
39
September, 2022
29
February, 2021
2
May, 2021
January, 2022
1
March, 2024
Available data
57
bed bed3+
13
bed bed9
1
tsv
Organism
71
Homo sapiens
Biosample type
49
cell line
13
tissue
9
primary cell
Organ
696
epithelium
585
kidney
390
brain
350
connective tissue
340
musculature of body
294
lung
262
intestine
216
heart
214
limb
212
vasculature
206
bodily fluid
203
embryo
197
pancreas
195
blood
187
skin of body
166
blood vessel
162
large intestine
136
extraembryonic component
127
liver
108
stomach
80
small intestine
79
mammary gland
79
uterus
76
adipose tissue
74
bone element
71
prostate gland
68
placenta
64
adrenal gland
61
penis
57
artery
57
ureter
54
lymph node
48
eye
47
thymus
42
gonad
40
spinal cord
36
esophagus
31
spleen
22
lymphoid tissue
22
testis
20
ovary
20
vein
19
nerve
19
thyroid gland
17
lymphatic vessel
17
mouth
12
bronchus
12
pituitary gland
11
bone marrow
11
breast
10
skeleton
9
tongue
9
urinary bladder
9
vagina
4
trachea
3
nose
1
pericardium
Project
71
AMP
Genome assembly (visualization)
70
hg19
13
GRCh38
annotation_type!
accessible chromatin
variant allelic effects
month_released!
January, 2022
BIOSAMPLE
TYPE
71 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
gene expression
cell line
22Rv1
4
2
2
1
1
LNCaP clone FGC
3
2
2
PC-3
2
1
1
1
1
RWPE1
2
1
1
1
1
LNCAP
2
1
1
1
+ See 5 more…
tissue
prostate gland
4
2
2
2
2
prostate
1
primary cell
epithelial cell of prostate
4
3
2
See all biosamples
Download