Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
43
candidate regulatory elements
24
target gene predictions
21
chromatin state
10
binding sites
accessible chromatin
7
histone modifications
3
Fine-mapped variants
3
eQTL
2
gene expression
1
variant allelic effects
Date released
63
September, 2022
38
February, 2021
3
March, 2020
3
May, 2021
2
January, 2022
1
February, 2020
1
February, 2024
1
January, 2020
1
March, 2024
1
October, 2022
Available data
85
bed bed3+
21
bed bed9
6
tsv
Organism
114
Homo sapiens
Biosample type
51
cell line
49
tissue
14
primary cell
Organ
737
epithelium
602
kidney
424
brain
372
connective tissue
348
musculature of body
296
lung
268
intestine
230
vasculature
229
heart
224
limb
212
pancreas
206
bodily fluid
203
embryo
195
blood
191
skin of body
178
blood vessel
164
large intestine
137
extraembryonic component
132
liver
111
stomach
82
adipose tissue
81
small intestine
80
mammary gland
80
uterus
74
bone element
73
prostate gland
69
placenta
66
adrenal gland
64
artery
61
penis
60
ureter
54
lymph node
50
eye
47
thymus
45
gonad
41
esophagus
41
spinal cord
32
spleen
24
testis
22
lymphoid tissue
22
nerve
21
ovary
21
thyroid gland
21
vein
18
mouth
17
lymphatic vessel
bronchus
13
pituitary gland
12
breast
11
bone marrow
10
skeleton
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
114
AMP
Genome assembly (visualization)
110
hg19
27
GRCh38
annotation_type!
accessible chromatin
organ_slims!
bronchus
BIOSAMPLE
TYPE
114 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
Fine-mapped variants
eQTL
gene expression
variant allelic effects
cell line
22Rv1
4
2
2
1
1
LNCaP clone FGC
3
2
2
PC-3
2
1
1
1
1
RWPE1
2
1
1
1
1
LNCAP
2
1
1
1
+ See 6 more…
tissue
spinal cord
14
8
7
1
prostate gland
4
2
2
2
2
1
C1 segment of cervical spinal cord
3
1
1
prostate
1
primary cell
epithelial cell of prostate
4
3
2
astrocyte of the spinal cord
2
1
1
luminal epithelial cell of prostatic duct
1
See all biosamples
Download