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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1072
target gene predictions
872
histone modifications
binding sites
674
gene expression
521
accessible chromatin
167
differential activity
140
variant allelic effects
75
chromatin state
40
eQTL
6
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
2
Fine-mapped variants
1
representative DNase hypersensitivity sites
Date released
1861
February, 2021
1672
September, 2022
292
May, 2021
289
June, 2020
286
September, 2023
162
February, 2024
144
May, 2020
91
August, 2021
70
March, 2023
56
January, 2021
55
March, 2020
44
November, 2022
43
May, 2022
39
February, 2020
35
August, 2017
30
March, 2024
26
February, 2023
21
January, 2020
19
April, 2020
9
August, 2018
8
October, 2022
2
January, 2018
1
April, 2019
1
August, 2020
1
August, 2022
1
January, 2022
1
July, 2020
1
June, 2021
1
November, 2019
1
November, 2020
1
October, 2019
Available data
4312
bed bed3+
792
tsv
164
bigWig
108
txt
34
bed bed9+
24
csv
16
bigBed narrowPeak
9
bigBed bed9
5
bed bed9
4
bam
3
bed gappedPeak
3
xls
Organism
5217
Homo sapiens
Biosample type
1879
tissue
1668
primary cell
1344
cell line
367
in vitro differentiated cells
4
stem cell
Organ
678
epithelium
540
kidney
303
connective tissue
298
brain
272
musculature of body
222
lung
211
pancreas
204
intestine
164
limb
164
vasculature
157
heart
139
skin of body
125
large intestine
122
embryo
120
blood vessel
119
bodily fluid
111
blood
106
extraembryonic component
88
liver
87
eye
86
stomach
62
adipose tissue
60
small intestine
58
bone element
56
prostate gland
55
mammary gland
51
placenta
48
adrenal gland
48
ureter
47
penis
42
lymph node
41
artery
36
thymus
34
gonad
31
esophagus
28
spinal cord
25
spleen
21
uterus
18
lymphoid tissue
17
testis
16
ovary
16
thyroid gland
15
vein
14
lymphatic vessel
14
mouth
14
nerve
12
pituitary gland
10
breast
10
bronchus
9
bone marrow
8
tongue
8
urinary bladder
7
skeleton
7
vagina
3
nose
3
trachea
1
pericardium
Project
4893
AMP
281
KPMP
57
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
6148
hg19
GRCh38
hg18
annotation_type!
binding sites
assembly!
hg18
GRCh38
BIOSAMPLE
TYPE
5264 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
gene expression
accessible chromatin
differential activity
variant allelic effects
chromatin state
eQTL
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
Fine-mapped variants
representative DNase hypersensitivity sites
tissue
stomach
40
21
1
1
3
heart
37
20
1
3
2
2
kidney
29
14
2
7
1
1
1
brain
29
16
3
1
1
1
lung
33
17
1
+ See 229 more…
primary cell
CD8-positive, alpha-beta T cell
7
4
30
3
3
1
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
2
3
monocyte
2
2
15
5
1
2
1
1
CD14-positive monocyte
8
19
+ See 380 more…
cell line
A549
21
19
1
1
EndoC_BH1
1
1
8
7
3
1
MCF-7
9
6
2
1
K562
7
7
1
1
1
H1-hESC
1
2
1
8
1
+ See 622 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
4
4
neural progenitor cell
5
5
2
7
embryonic stem cell
1
1
6
5
cardiomyocytes
11
+ See 119 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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