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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
553
accessible chromatin
552
gene expression
437
target gene predictions
407
candidate regulatory elements
304
histone modifications
241
chromatin state
152
differential activity
binding sites
87
variant allelic effects
44
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
1
representative DNase hypersensitivity sites
Date released
592
September, 2022
536
February, 2021
333
November, 2021
295
May, 2021
285
September, 2023
178
February, 2024
93
May, 2020
74
June, 2020
73
August, 2021
56
January, 2021
55
March, 2023
40
January, 2022
40
May, 2022
27
November, 2022
26
January, 2020
19
April, 2020
16
February, 2020
15
March, 2020
10
August, 2017
9
August, 2018
9
October, 2019
8
October, 2022
4
February, 2023
3
November, 2020
2
November, 2019
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1804
bed bed3+
664
tsv
422
bigWig
204
bed bed9
108
txt
27
bed bed9+
24
csv
16
bigBed narrowPeak
9
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
2756
Homo sapiens
Biosample type
2616
tissue
2369
primary cell
1709
cell line
432
in vitro differentiated cells
4
stem cell
Organ
812
epithelium
309
kidney
307
connective tissue
154
vasculature
128
pancreas
100
blood vessel
100
skin of body
63
liver
51
embryo
47
musculature of body
43
extraembryonic component
41
mammary gland
41
penis
37
brain
32
lung
30
heart
27
eye
24
artery
23
intestine
18
lymphatic vessel
18
vein
14
bronchus
12
bone element
11
adrenal gland
11
bone marrow
11
stomach
10
esophagus
10
prostate gland
8
placenta
7
blood
7
bodily fluid
6
large intestine
4
gonad
4
mouth
4
nose
4
small intestine
4
spinal cord
4
uterus
3
thyroid gland
3
trachea
2
adipose tissue
2
ovary
1
limb
1
pericardium
1
testis
1
thymus
Project
2109
AMP
333
ENCODE
281
KPMP
59
T1D
19
LungMap
Genome assembly (visualization)
2052
hg19
766
GRCh38
annotation_type!
binding sites
BIOSAMPLE
TYPE
2801 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
representative DNase hypersensitivity sites
primary cell
monocyte
18
15
2
86
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
4
3
5
7
30
1
B cell
6
2
10
14
8
endothelial cell
15
9
7
1
2
1
2
+ See 444 more…
in vitro differentiated cells
neural progenitor cell
10
7
5
5
15
4
hematopoietic multipotent progenitor cell
1
1
10
19
1
10
adipocyte
4
1
6
4
1
6
embryonic stem cell
6
1
1
5
cardiomyocytes
11
+ See 120 more…
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