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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
977
histone modifications
913
accessible chromatin
binding sites
144
eQTL
140
variant allelic effects
75
chromatin state
43
gene expression
13
caQTL
9
differential activity
5
hQTL
5
sQTL
3
meQTL
3
other
3
pQTL
2
Fine-mapped variants
2
variant to gene
Date released
1694
February, 2021
1678
September, 2022
333
November, 2021
305
February, 2024
296
May, 2021
289
June, 2020
152
May, 2020
106
January, 2022
78
August, 2021
66
January, 2020
56
January, 2021
49
May, 2022
48
March, 2020
44
November, 2022
35
August, 2017
31
February, 2023
19
April, 2020
17
February, 2020
13
March, 2023
13
November, 2019
10
October, 2022
9
August, 2018
9
October, 2019
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5106
bed bed3+
tsv
bed bed9
546
bigWig
108
txt
40
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5318
Homo sapiens
Biosample type
1918
tissue
1616
primary cell
1508
cell line
317
in vitro differentiated cells
4
stem cell
Organ
532
epithelium
323
connective tissue
317
brain
317
kidney
283
musculature of body
231
lung
225
intestine
183
pancreas
175
heart
175
limb
165
embryo
150
skin of body
149
vasculature
146
bodily fluid
138
blood
133
large intestine
114
blood vessel
110
extraembryonic component
101
liver
94
stomach
92
eye
73
uterus
65
small intestine
63
bone element
61
mammary gland
58
adrenal gland
57
adipose tissue
56
prostate gland
54
placenta
51
ureter
47
penis
45
artery
42
lymph node
37
gonad
37
thymus
36
esophagus
28
spinal cord
26
spleen
18
lymphoid tissue
18
ovary
18
testis
18
thyroid gland
15
nerve
15
skeleton
15
vein
14
mouth
12
bronchus
12
lymphatic vessel
12
pituitary gland
10
bone marrow
10
breast
7
tongue
7
urinary bladder
7
vagina
3
nose
3
trachea
1
pericardium
Project
4939
AMP
333
ENCODE
60
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
5183
hg19
895
GRCh38
3
hg18
annotation_type!
binding sites
files.file_type!
bed bed9
tsv
BIOSAMPLE
TYPE
5365 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
eQTL
variant allelic effects
chromatin state
gene expression
caQTL
differential activity
hQTL
sQTL
meQTL
other
pQTL
Fine-mapped variants
variant to gene
tissue
stomach
40
21
1
3
1
heart
37
20
1
5
2
kidney
29
14
2
10
1
1
brain
29
16
3
2
2
1
lung
33
17
1
+ See 223 more…
primary cell
monocyte
2
86
18
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
1
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
15
1
2
1
2
+ See 340 more…
cell line
HeLa-S3
5
55
A549
21
19
1
1
H1-hESC
1
39
1
1
K562
7
23
1
1
1
HFFc6
19
+ See 627 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
hematopoietic multipotent progenitor cell
19
10
1
1
adipocyte
4
6
1
4
4
embryonic stem cell
1
1
6
mesenchymal stem cell
3
3
1
1
+ See 105 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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