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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
histone modifications
913
accessible chromatin
binding sites
144
eQTL
140
variant allelic effects
75
chromatin state
43
gene expression
13
caQTL
9
differential activity
5
hQTL
5
sQTL
3
meQTL
3
other
3
pQTL
2
Fine-mapped variants
2
variant to gene
Date released
1672
September, 2022
854
February, 2021
333
November, 2021
305
February, 2024
289
June, 2020
182
May, 2021
152
May, 2020
106
January, 2022
66
January, 2020
61
August, 2021
56
January, 2021
49
May, 2022
48
March, 2020
44
November, 2022
35
August, 2017
31
February, 2023
19
April, 2020
17
February, 2020
13
March, 2023
13
November, 2019
10
October, 2022
9
August, 2018
9
October, 2019
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
4130
bed bed3+
tsv
bed bed9
546
bigWig
108
txt
40
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
4341
Homo sapiens
Biosample type
1829
tissue
1406
primary cell
924
cell line
223
in vitro differentiated cells
4
stem cell
Organ
504
epithelium
311
kidney
298
connective tissue
276
musculature of body
269
brain
227
lung
217
intestine
177
pancreas
173
limb
169
heart
154
embryo
141
vasculature
137
skin of body
128
large intestine
121
bodily fluid
114
blood
108
blood vessel
105
extraembryonic component
93
stomach
88
eye
87
liver
71
uterus
65
small intestine
58
adrenal gland
57
bone element
56
adipose tissue
56
mammary gland
51
placenta
51
ureter
49
prostate gland
42
penis
40
artery
38
lymph node
36
esophagus
36
gonad
36
thymus
28
spinal cord
26
spleen
18
ovary
18
thyroid gland
17
lymphoid tissue
17
testis
15
nerve
15
skeleton
14
mouth
14
vein
11
bronchus
11
lymphatic vessel
11
pituitary gland
10
breast
8
bone marrow
7
tongue
7
urinary bladder
7
vagina
3
nose
1
pericardium
1
trachea
Project
3962
AMP
333
ENCODE
60
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
4207
hg19
790
GRCh38
3
hg18
annotation_type!
binding sites
histone modifications
files.file_type!
bed bed9
tsv
BIOSAMPLE
TYPE
4388 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
eQTL
variant allelic effects
chromatin state
gene expression
caQTL
differential activity
hQTL
sQTL
meQTL
other
pQTL
Fine-mapped variants
variant to gene
tissue
stomach
40
21
3
1
heart
37
20
5
2
kidney
29
14
10
1
1
lung
33
17
1
muscle of arm
33
16
1
1
+ See 175 more…
primary cell
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
15
1
2
1
2
fibroblast
4
16
2
6
monocyte
2
18
4
2
1
1
+ See 300 more…
cell line
HeLa-S3
5
55
A549
21
19
1
H1-hESC
1
39
1
K562
7
23
1
1
HFFc6
19
+ See 277 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
1
neural progenitor cell
5
5
10
adipocyte
4
6
4
4
embryonic stem cell
1
6
mesenchymal stem cell
3
3
1
+ See 61 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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