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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1610
candidate regulatory elements
1271
target gene predictions
966
histone modifications
chromatin state
900
accessible chromatin
binding sites
672
gene expression
171
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
1829
February, 2021
1620
September, 2022
377
May, 2021
331
November, 2021
316
February, 2024
286
September, 2023
278
June, 2020
152
May, 2020
126
March, 2020
119
August, 2021
106
January, 2022
83
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
44
November, 2022
32
February, 2023
29
March, 2024
19
April, 2020
15
May, 2022
13
November, 2019
10
October, 2022
9
August, 2018
9
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
4895
bed bed3+
889
tsv
542
bigWig
108
txt
24
csv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
5960
Homo sapiens
Biosample type
2157
primary cell
2071
tissue
1411
cell line
364
in vitro differentiated cells
3
stem cell
Organ
853
epithelium
568
kidney
381
connective tissue
378
brain
294
musculature of body
255
pancreas
231
lung
224
intestine
212
vasculature
199
heart
192
limb
embryo
160
blood vessel
151
skin of body
145
bodily fluid
137
blood
132
large intestine
126
liver
110
extraembryonic component
95
stomach
94
eye
77
adipose tissue
75
uterus
66
bone element
64
small intestine
61
artery
60
mammary gland
59
adrenal gland
57
prostate gland
54
placenta
51
ureter
47
penis
42
lymph node
39
gonad
38
esophagus
37
thymus
33
spinal cord
27
spleen
21
nerve
19
lymphoid tissue
19
ovary
19
testis
19
thyroid gland
17
lymphatic vessel
15
mouth
15
skeleton
15
vein
13
pituitary gland
12
bronchus
11
breast
9
bone marrow
tongue
8
urinary bladder
8
vagina
3
nose
3
trachea
1
pericardium
Project
5301
AMP
331
ENCODE
281
KPMP
60
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
5033
hg19
943
GRCh38
3
hg18
annotation_type!
binding sites
chromatin state
organ_slims!
embryo
tongue
BIOSAMPLE
TYPE
6008 results
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table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
2
86
18
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
9
1
2
2
B cell
14
10
6
2
+ See 437 more…
tissue
heart
37
20
1
5
3
2
stomach
40
21
1
3
1
1
kidney
29
14
2
10
7
1
1
brain
29
16
3
2
1
2
1
lung
33
17
1
1
+ See 247 more…
cell line
HeLa-S3
5
55
A549
21
19
1
1
K562
7
23
1
1
EndoC_BH1
1
1
8
8
3
1
HFFc6
19
+ See 613 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
cardiomyocytes
11
extended pluripotent stem (EPS) cells
9
+ See 112 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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