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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
128
target gene predictions
81
candidate regulatory elements
77
accessible chromatin
58
gene expression
45
chromatin state
33
differential activity
binding sites
17
histone modifications
15
eQTL
11
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
125
September, 2022
76
February, 2024
68
February, 2021
47
March, 2023
40
May, 2021
20
January, 2021
20
November, 2021
16
August, 2021
14
June, 2020
9
March, 2020
7
August, 2018
6
May, 2020
6
October, 2019
4
August, 2017
4
January, 2020
4
January, 2022
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
319
bed bed3+
86
tsv
59
bigWig
40
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
474
Homo sapiens
Biosample type
150
cell line
146
primary cell
144
tissue
33
in vitro differentiated cells
1
stem cell
Organ
906
epithelium
645
kidney
450
brain
427
connective tissue
368
musculature of body
302
lung
283
intestine
272
pancreas
250
heart
245
vasculature
242
limb
202
embryo
188
blood vessel
186
skin of body
172
bodily fluid
168
large intestine
162
blood
143
extraembryonic component
143
liver
119
stomach
103
eye
87
adipose tissue
84
small intestine
81
bone element
79
uterus
75
mammary gland
73
adrenal gland
70
placenta
70
prostate gland
69
artery
64
ureter
57
penis
50
lymph node
48
thymus
47
gonad
45
esophagus
41
spinal cord
33
spleen
25
nerve
24
lymphoid tissue
23
ovary
23
testis
23
thyroid gland
20
vein
19
lymphatic vessel
19
mouth
18
skeleton
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
432
AMP
20
ENCODE
20
T1D
2
community
Genome assembly (visualization)
373
hg19
141
GRCh38
annotation_type!
binding sites
BIOSAMPLE
TYPE
474 results
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Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
gene expression
chromatin state
differential activity
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
cell line
H1-hESC
39
1
1
8
1
1
EndoC_BH1
1
8
8
3
1
H9
8
7
1
H7-hESC
2
1
1
1
1
CyT49
4
1
+ See 16 more…
primary cell
pancreatic beta cell
3
8
3
3
1
pancreatic ductal cell
3
6
3
3
2
1
trophoblast cell
5
7
1
4
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
+ See 16 more…
tissue
islet of Langerhans
1
6
11
3
1
13
1
2
2
2
body of pancreas
5
8
2
4
1
1
3
pancreas
5
5
5
3
1
1
1
chorionic villus
4
8
4
endocrine pancreas
4
7
4
+ See 12 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 4 more…
stem cell
H1-hESC
1
See all biosamples
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