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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
253
gene expression
212
accessible chromatin
122
target gene predictions
100
candidate regulatory elements
92
differential activity
53
chromatin state
binding sites
41
variant allelic effects
histone modifications
3
eQTL
2
caQTL
Date released
155
September, 2023
150
September, 2022
140
February, 2021
127
November, 2021
70
February, 2024
38
March, 2023
34
May, 2021
25
June, 2020
20
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
1
October, 2022
Available data
476
bed bed3+
324
tsv
176
bigWig
78
txt
50
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
878
Homo sapiens
Biosample type
772
primary cell
56
tissue
29
cell line
21
in vitro differentiated cells
Organ
878
epithelium
639
kidney
404
connective tissue
402
brain
361
musculature of body
298
lung
275
intestine
266
pancreas
244
heart
240
limb
237
vasculature
191
embryo
182
blood vessel
173
skin of body
163
large intestine
147
bodily fluid
138
blood
138
extraembryonic component
129
liver
118
stomach
99
eye
86
adipose tissue
84
small intestine
77
uterus
75
bone element
73
adrenal gland
70
mammary gland
67
placenta
64
artery
64
ureter
63
prostate gland
52
penis
47
thymus
46
gonad
46
lymph node
45
esophagus
41
spinal cord
33
spleen
25
nerve
23
lymphoid tissue
23
ovary
23
thyroid gland
22
testis
19
mouth
19
vein
18
lymphatic vessel
18
skeleton
13
breast
13
bronchus
12
pituitary gland
10
tongue
10
urinary bladder
10
vagina
9
bone marrow
4
nose
1
pericardium
1
trachea
Project
567
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
529
hg19
224
GRCh38
annotation_type!
binding sites
histone modifications
BIOSAMPLE
TYPE
878 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
variant allelic effects
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
1
2
hepatocyte
13
8
3
1
1
2
epithelial cell of proximal tubule
16
1
1
2
1
1
glomerular endothelial cell
14
2
1
2
1
1
foreskin keratinocyte
4
11
4
+ See 145 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
pancreatic ductal cell
2
breast - mammary tissue
1
+ See 11 more…
cell line
EndoC_BH1
8
8
1
3
1
colon epithelial cell
1
1
1
glomerular visceral epithelial cell
1
1
choroid plexus epithelial cell
1
epithelial cell of prostate
1
+ See 1 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
+ See 4 more…
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