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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
253
gene expression
212
accessible chromatin
target gene predictions
100
candidate regulatory elements
92
differential activity
53
chromatin state
binding sites
41
variant allelic effects
28
histone modifications
3
eQTL
2
caQTL
Date released
162
February, 2021
155
September, 2023
102
September, 2022
78
November, 2021
70
February, 2024
38
March, 2023
25
June, 2020
24
May, 2021
23
August, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
10
January, 2021
9
February, 2020
7
April, 2020
6
August, 2018
5
October, 2019
4
March, 2020
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
1
October, 2022
Available data
382
bed bed3+
324
tsv
173
bigWig
78
txt
50
bed bed9
11
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
784
Homo sapiens
Biosample type
675
primary cell
54
tissue
33
cell line
22
in vitro differentiated cells
Organ
784
epithelium
570
kidney
374
brain
351
connective tissue
288
musculature of body
228
pancreas
224
lung
214
vasculature
210
intestine
201
heart
193
limb
163
blood vessel
142
skin of body
124
large intestine
122
liver
118
embryo
115
bodily fluid
107
blood
107
extraembryonic component
94
eye
89
stomach
74
adipose tissue
65
bone element
61
artery
61
small intestine
56
mammary gland
55
prostate gland
53
placenta
52
adrenal gland
51
ureter
46
penis
41
lymph node
36
gonad
35
esophagus
34
thymus
32
spinal cord
25
spleen
22
nerve
21
uterus
19
testis
18
lymphoid tissue
17
thyroid gland
16
lymphatic vessel
16
ovary
16
vein
15
mouth
15
skeleton
11
bronchus
10
breast
8
bone marrow
8
tongue
8
vagina
7
urinary bladder
3
nose
3
pituitary gland
3
trachea
1
pericardium
Project
532
AMP
155
KPMP
78
ENCODE
10
T1D
7
LungMap
2
community
Genome assembly (visualization)
435
hg19
179
GRCh38
annotation_type!
binding sites
target gene predictions
BIOSAMPLE
TYPE
784 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
differential activity
chromatin state
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
2
1
1
2
hepatocyte
13
8
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
glomerular endothelial cell
14
2
2
1
1
foreskin keratinocyte
11
4
+ See 144 more…
tissue
pigmented layer of retina
20
esophagus squamous epithelium
1
6
2
breast epithelium
1
5
2
pancreatic ductal cell
2
breast - mammary tissue
1
+ See 14 more…
cell line
EndoC_BH1
8
8
3
1
choroid plexus epithelial cell
1
1
colon epithelial cell
1
1
epithelial cell of prostate
1
1
glomerular visceral epithelial cell
1
1
+ See 5 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
foreskin keratinocyte
1
1
+ See 4 more…
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