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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
254
gene expression
224
accessible chromatin
179
target gene predictions
147
candidate regulatory elements
92
differential activity
binding sites
80
chromatin state
53
histone modifications
41
variant allelic effects
5
eQTL
2
caQTL
1
pQTL
Date released
226
September, 2022
211
February, 2021
155
September, 2023
127
November, 2021
98
February, 2024
38
March, 2023
38
May, 2021
37
June, 2020
26
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
5
August, 2017
5
October, 2019
3
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
1
October, 2022
Available data
648
bed bed3+
325
tsv
176
bigWig
78
txt
75
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1078
Homo sapiens
Biosample type
796
primary cell
196
cell line
63
tissue
23
in vitro differentiated cells
Organ
906
epithelium
645
kidney
450
brain
427
connective tissue
368
musculature of body
302
lung
283
intestine
272
pancreas
250
heart
245
vasculature
242
limb
202
embryo
188
blood vessel
186
skin of body
172
bodily fluid
168
large intestine
162
blood
143
extraembryonic component
143
liver
119
stomach
103
eye
87
adipose tissue
84
small intestine
81
bone element
79
uterus
75
mammary gland
73
adrenal gland
70
placenta
70
prostate gland
69
artery
64
ureter
57
penis
50
lymph node
48
thymus
47
gonad
45
esophagus
41
spinal cord
33
spleen
25
nerve
24
lymphoid tissue
23
ovary
23
testis
23
thyroid gland
20
vein
19
lymphatic vessel
19
mouth
18
skeleton
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
767
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
728
hg19
281
GRCh38
annotation_type!
binding sites
BIOSAMPLE
TYPE
1078 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
histone modifications
variant allelic effects
eQTL
caQTL
pQTL
primary cell
endothelial cell
9
15
7
1
2
1
2
hepatocyte
13
8
3
1
1
4
2
epithelial cell of proximal tubule
16
1
1
2
1
1
glomerular endothelial cell
14
2
1
2
1
1
foreskin keratinocyte
4
11
4
+ See 148 more…
cell line
K562
1
23
7
7
1
EndoC_BH1
8
8
1
3
1
GM12878
1
8
2
2
1
HAP-1
1
2
2
1
1
NAMALWA cell
1
2
2
2
+ See 36 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
blood
2
pancreatic ductal cell
2
+ See 17 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
foreskin keratinocyte
1
1
+ See 4 more…
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