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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
272
gene expression
251
accessible chromatin
207
candidate regulatory elements
196
target gene predictions
123
chromatin state
92
differential activity
75
histone modifications
binding sites
56
variant allelic effects
36
Fine-mapped variants
32
eQTL
2
caQTL
Date released
325
September, 2022
261
February, 2021
158
September, 2023
127
November, 2021
71
February, 2024
45
June, 2020
45
May, 2021
44
March, 2020
41
January, 2020
38
March, 2023
32
May, 2020
27
February, 2020
23
August, 2021
20
January, 2021
18
January, 2022
15
November, 2022
12
February, 2023
9
August, 2017
7
April, 2020
6
August, 2018
5
October, 2019
4
May, 2019
3
March, 2024
2
May, 2022
2
November, 2019
1
July, 2020
1
October, 2022
Available data
785
bed bed3+
391
tsv
195
bigWig
114
bed bed9
78
txt
14
bigBed narrowPeak
8
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1341
Homo sapiens
Biosample type
810
primary cell
403
tissue
101
cell line
27
in vitro differentiated cells
1
stem cell
Organ
906
epithelium
645
kidney
450
brain
429
connective tissue
368
musculature of body
302
lung
283
intestine
272
pancreas
250
heart
245
vasculature
242
limb
202
embryo
188
blood vessel
186
skin of body
172
bodily fluid
168
large intestine
162
blood
143
extraembryonic component
143
liver
119
stomach
103
eye
87
adipose tissue
84
small intestine
81
bone element
79
uterus
75
mammary gland
73
adrenal gland
70
placenta
70
prostate gland
69
artery
64
ureter
57
penis
50
lymph node
48
thymus
47
gonad
45
esophagus
41
spinal cord
33
spleen
25
nerve
24
lymphoid tissue
23
ovary
23
testis
23
thyroid gland
20
vein
19
lymphatic vessel
19
mouth
18
skeleton
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
1031
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
950
hg19
376
GRCh38
annotation_type!
binding sites
BIOSAMPLE
TYPE
1342 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
differential activity
histone modifications
variant allelic effects
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
9
15
7
1
2
1
2
hepatocyte
13
8
1
3
1
4
2
epithelial cell of proximal tubule
16
1
2
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
foreskin keratinocyte
11
4
4
+ See 151 more…
tissue
brain
1
2
29
16
18
3
1
2
caudate nucleus
1
2
5
3
4
1
1
3
2
pigmented layer of retina
20
substantia nigra
1
5
2
3
1
3
3
cerebellum
2
1
3
2
2
1
3
2
+ See 74 more…
cell line
EndoC_BH1
8
8
1
3
1
SK-N-DZ
1
4
2
2
1
pituitary stalk
10
SK-N-SH
4
3
2
SK-N-MC
1
2
1
1
1
+ See 18 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
foreskin keratinocyte
1
1
+ See 7 more…
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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