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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
270
gene expression
228
accessible chromatin
142
target gene predictions
124
candidate regulatory elements
98
differential activity
70
chromatin state
binding sites
45
variant allelic effects
31
histone modifications
18
eQTL
5
Fine-mapped variants
2
caQTL
2
sQTL
2
variant to gene
Date released
191
September, 2022
185
February, 2021
155
September, 2023
128
November, 2021
74
February, 2024
51
March, 2023
42
May, 2021
31
August, 2021
28
June, 2020
22
January, 2021
20
May, 2020
18
January, 2020
15
November, 2022
13
March, 2020
12
February, 2023
11
February, 2020
7
April, 2020
7
August, 2018
6
August, 2017
6
October, 2019
4
January, 2022
2
March, 2024
2
May, 2022
2
November, 2019
1
April, 2019
1
January, 2018
1
July, 2020
1
June, 2021
1
October, 2022
Available data
577
bed bed3+
350
tsv
188
bigWig
78
txt
63
bed bed9
15
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1037
Homo sapiens
Biosample type
805
primary cell
163
tissue
46
cell line
23
in vitro differentiated cells
Organ
906
epithelium
645
kidney
450
brain
427
connective tissue
368
musculature of body
302
lung
283
intestine
272
pancreas
250
heart
245
vasculature
242
limb
202
embryo
188
blood vessel
186
skin of body
172
bodily fluid
168
large intestine
162
blood
143
extraembryonic component
143
liver
119
stomach
103
eye
87
adipose tissue
84
small intestine
81
bone element
79
uterus
75
mammary gland
73
adrenal gland
70
placenta
70
prostate gland
69
artery
64
ureter
57
penis
50
lymph node
48
thymus
47
gonad
45
esophagus
41
spinal cord
33
spleen
25
nerve
24
lymphoid tissue
23
ovary
23
testis
23
thyroid gland
20
vein
19
lymphatic vessel
19
mouth
18
skeleton
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
723
AMP
155
KPMP
128
ENCODE
22
T1D
7
LungMap
2
community
Genome assembly (visualization)
655
hg19
259
GRCh38
annotation_type!
binding sites
BIOSAMPLE
TYPE
1037 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
sQTL
variant to gene
primary cell
endothelial cell
9
15
7
2
1
1
2
hepatocyte
13
8
3
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
glomerular endothelial cell
14
2
1
2
1
1
foreskin keratinocyte
4
11
4
+ See 152 more…
tissue
islet of Langerhans
11
6
1
3
1
1
13
2
2
2
body of pancreas
2
5
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
pigmented layer of retina
20
endocrine pancreas
4
7
4
+ See 19 more…
cell line
EndoC_BH1
8
8
1
3
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
colon epithelial cell
1
1
1
+ See 8 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
foreskin keratinocyte
1
1
+ See 4 more…
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