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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
116
candidate regulatory elements
101
target gene predictions
63
chromatin state
binding sites
30
histone modifications
22
accessible chromatin
4
eQTL
3
gene expression
1
pQTL
Date released
173
September, 2022
88
February, 2021
31
February, 2024
19
June, 2020
9
May, 2021
6
November, 2021
5
August, 2017
3
August, 2021
3
March, 2024
2
January, 2022
1
March, 2020
Available data
275
bed bed3+
58
bed bed9
3
bigWig
3
tsv
Organism
340
Homo sapiens
Biosample type
190
cell line
137
tissue
13
primary cell
Organ
906
epithelium
645
kidney
450
brain
427
connective tissue
368
musculature of body
302
lung
283
intestine
272
pancreas
250
heart
245
vasculature
242
limb
202
embryo
188
blood vessel
186
skin of body
172
bodily fluid
168
large intestine
162
blood
143
extraembryonic component
143
liver
119
stomach
103
eye
87
adipose tissue
84
small intestine
81
bone element
79
uterus
75
mammary gland
73
adrenal gland
70
placenta
70
prostate gland
69
artery
64
ureter
57
penis
50
lymph node
48
thymus
47
gonad
45
esophagus
41
spinal cord
33
spleen
25
nerve
24
lymphoid tissue
23
ovary
23
testis
23
thyroid gland
20
vein
19
lymphatic vessel
19
mouth
18
skeleton
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
334
AMP
6
ENCODE
Genome assembly (visualization)
335
hg19
96
GRCh38
annotation_type!
binding sites
BIOSAMPLE
TYPE
340 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
accessible chromatin
eQTL
gene expression
pQTL
cell line
K562
7
23
7
1
1
GM12878
2
8
2
1
1
HAP-1
2
2
1
1
1
HT-29
2
2
1
1
1
NAMALWA cell
2
2
2
1
+ See 34 more…
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 9 more…
primary cell
colon epithelial cell
3
3
peripheral blood mononuclear cell
4
1
peripheral blood stem cell
1
1
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