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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
23
gene expression
22
candidate regulatory elements
21
accessible chromatin
20
target gene predictions
16
chromatin state
binding sites
12
histone modifications
8
eQTL
4
differential activity
3
Fine-mapped variants
3
variant allelic effects
1
caQTL
Date released
43
September, 2022
23
February, 2024
18
February, 2021
10
March, 2020
9
August, 2021
4
June, 2020
4
March, 2023
4
November, 2021
3
August, 2017
3
May, 2021
2
February, 2020
2
January, 2020
2
May, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
81
bed bed3+
27
tsv
21
bigWig
13
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
133
Homo sapiens
Biosample type
57
tissue
47
primary cell
22
cell line
7
in vitro differentiated cells
Organ
906
epithelium
645
kidney
450
brain
connective tissue
368
musculature of body
302
lung
283
intestine
272
pancreas
250
heart
245
vasculature
242
limb
202
embryo
188
blood vessel
186
skin of body
172
bodily fluid
168
large intestine
162
blood
143
extraembryonic component
143
liver
119
stomach
103
eye
87
adipose tissue
84
small intestine
81
bone element
79
uterus
75
mammary gland
73
adrenal gland
70
placenta
70
prostate gland
69
artery
64
ureter
57
penis
50
lymph node
48
thymus
47
gonad
45
esophagus
41
spinal cord
33
spleen
25
nerve
24
lymphoid tissue
23
ovary
23
testis
23
thyroid gland
20
vein
19
lymphatic vessel
19
mouth
18
skeleton
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
129
AMP
4
ENCODE
Genome assembly (visualization)
104
hg19
51
GRCh38
1
hg18
annotation_type!
binding sites
organ_slims!
connective tissue
BIOSAMPLE
TYPE
133 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
histone modifications
eQTL
differential activity
Fine-mapped variants
variant allelic effects
caQTL
tissue
liver
1
13
4
10
9
2
7
1
1
right lobe of liver
1
2
1
1
1
3
primary cell
hepatocyte
13
1
8
3
1
4
2
endothelial cell of hepatic sinusoid
4
6
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
cell line
HepG2
2
2
3
2
5
HuH-7
1
1
1
1
1
HuH-7.5
1
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
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