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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
256
gene expression
231
accessible chromatin
205
target gene predictions
193
candidate regulatory elements
101
chromatin state
binding sites
92
differential activity
60
histone modifications
41
variant allelic effects
8
eQTL
2
caQTL
Date released
289
September, 2022
243
February, 2021
155
September, 2023
129
November, 2021
98
February, 2024
43
June, 2020
42
May, 2021
38
March, 2023
25
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
5
August, 2017
5
March, 2024
5
October, 2019
3
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
1
October, 2022
Available data
733
bed bed3+
327
tsv
177
bigWig
96
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1189
Homo sapiens
Biosample type
830
primary cell
248
cell line
85
tissue
26
in vitro differentiated cells
Organ
906
epithelium
645
kidney
450
brain
429
connective tissue
368
musculature of body
302
lung
283
intestine
272
pancreas
250
heart
245
vasculature
242
limb
202
embryo
188
blood vessel
186
skin of body
172
bodily fluid
168
large intestine
162
blood
143
extraembryonic component
143
liver
119
stomach
103
eye
87
adipose tissue
84
small intestine
81
bone element
79
uterus
75
mammary gland
73
adrenal gland
70
placenta
70
prostate gland
69
artery
64
ureter
57
penis
50
lymph node
48
thymus
47
gonad
45
esophagus
41
spinal cord
33
spleen
25
nerve
24
lymphoid tissue
23
ovary
23
testis
23
thyroid gland
20
vein
19
lymphatic vessel
19
mouth
18
skeleton
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
876
AMP
155
KPMP
129
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
834
hg19
307
GRCh38
annotation_type!
binding sites
BIOSAMPLE
TYPE
1189 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
differential activity
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
endothelial cell
9
15
7
1
2
1
2
hepatocyte
13
8
3
1
1
4
2
epithelial cell of proximal tubule
16
1
1
2
1
1
glomerular endothelial cell
14
2
1
2
1
1
foreskin keratinocyte
4
11
4
+ See 153 more…
cell line
K562
1
23
7
7
1
EndoC_BH1
8
8
1
3
1
GM12878
1
8
2
2
1
HAP-1
1
2
2
1
1
NAMALWA cell
1
2
2
2
+ See 50 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
lower leg skin
2
6
2
skin of body
1
1
1
3
+ See 23 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
foreskin keratinocyte
1
1
+ See 6 more…
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