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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
249
candidate regulatory elements
186
target gene predictions
147
chromatin state
133
accessible chromatin
82
histone modifications
70
gene expression
binding sites
53
eQTL
42
Fine-mapped variants
31
variant allelic effects
14
differential activity
2
caQTL
2
pQTL
Date released
378
September, 2022
230
February, 2021
58
November, 2021
47
March, 2020
44
June, 2020
35
January, 2020
29
May, 2021
27
February, 2020
27
January, 2022
26
May, 2020
20
February, 2024
20
September, 2023
14
August, 2017
11
August, 2021
7
March, 2023
7
November, 2022
4
May, 2019
3
April, 2020
3
March, 2024
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
November, 2019
1
October, 2022
Available data
693
bed bed3+
134
tsv
133
bed bed9
76
bigWig
8
bigBed bed9
7
txt
1
bigBed narrowPeak
Organism
1010
Homo sapiens
Biosample type
461
tissue
347
primary cell
145
cell line
56
in vitro differentiated cells
2
stem cell
Organ
906
epithelium
645
kidney
450
brain
429
connective tissue
368
musculature of body
302
lung
283
intestine
272
pancreas
250
heart
245
vasculature
242
limb
202
embryo
188
blood vessel
186
skin of body
172
bodily fluid
168
large intestine
162
blood
143
extraembryonic component
143
liver
119
stomach
103
eye
87
adipose tissue
84
small intestine
81
bone element
79
uterus
75
mammary gland
73
adrenal gland
70
placenta
70
prostate gland
69
artery
64
ureter
57
penis
50
lymph node
48
thymus
47
gonad
45
esophagus
41
spinal cord
33
spleen
25
nerve
24
lymphoid tissue
23
ovary
23
testis
23
thyroid gland
20
vein
19
lymphatic vessel
19
mouth
18
skeleton
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
927
AMP
58
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
890
hg19
307
GRCh38
2
hg18
annotation_type!
binding sites
BIOSAMPLE
TYPE
1011 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
gene expression
eQTL
Fine-mapped variants
variant allelic effects
differential activity
caQTL
pQTL
tissue
brain
29
16
18
2
3
1
2
1
adipose tissue
7
8
6
2
3
4
1
caudate nucleus
5
3
4
2
1
1
2
3
1
subcutaneous adipose tissue
2
1
2
5
6
3
1
1
omental fat pad
5
2
2
2
2
2
3
+ See 73 more…
primary cell
fibroblast
4
16
2
6
pericyte cell
1
10
1
10
foreskin keratinocyte
11
4
4
keratinocyte
3
5
3
2
2
1
fibroblast of lung
6
4
4
+ See 58 more…
cell line
SK-N-DZ
4
2
2
1
1
pituitary stalk
10
SK-N-SH
4
3
2
GM23248
2
1
1
1
1
SK-N-MC
2
1
1
1
1
+ See 36 more…
in vitro differentiated cells
adipocyte
4
6
6
4
1
1
mesenchymal stem cell
3
3
2
1
1
chondrocyte
5
foreskin keratinocyte
1
1
hippocampal neuron
1
1
+ See 14 more…
stem cell
mesenchymal stem cell
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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