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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
67
accessible chromatin
50
target gene predictions
49
gene expression
33
differential activity
32
candidate regulatory elements
21
chromatin state
16
eQTL
12
variant allelic effects
6
histone modifications
5
Fine-mapped variants
binding sites
2
sQTL
2
variant to gene
Date released
56
September, 2022
47
March, 2023
34
May, 2021
31
February, 2021
26
February, 2024
20
January, 2021
20
November, 2021
8
August, 2021
8
March, 2020
7
August, 2018
6
May, 2020
6
October, 2019
5
January, 2022
5
June, 2020
4
January, 2020
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
171
bed bed3+
77
tsv
58
bigWig
17
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
295
Homo sapiens
Biosample type
131
tissue
128
primary cell
33
cell line
3
in vitro differentiated cells
Organ
906
epithelium
645
kidney
450
brain
427
connective tissue
368
musculature of body
302
lung
283
intestine
272
pancreas
250
heart
245
vasculature
242
limb
202
embryo
188
blood vessel
186
skin of body
172
bodily fluid
168
large intestine
162
blood
143
extraembryonic component
143
liver
119
stomach
103
eye
87
adipose tissue
84
small intestine
81
bone element
79
uterus
75
mammary gland
73
adrenal gland
70
placenta
70
prostate gland
69
artery
64
ureter
57
penis
50
lymph node
48
thymus
47
gonad
45
esophagus
41
spinal cord
33
spleen
25
nerve
24
lymphoid tissue
23
ovary
23
testis
23
thyroid gland
20
vein
19
lymphatic vessel
19
mouth
18
skeleton
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
253
AMP
20
ENCODE
20
T1D
2
community
Genome assembly (visualization)
202
hg19
68
GRCh38
annotation_type!
binding sites
BIOSAMPLE
TYPE
295 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
differential activity
candidate regulatory elements
chromatin state
eQTL
variant allelic effects
histone modifications
Fine-mapped variants
sQTL
variant to gene
tissue
islet of Langerhans
6
1
11
3
13
1
1
2
2
2
body of pancreas
5
2
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
thyroid gland
1
5
8
4
1
endocrine pancreas
4
7
4
+ See 8 more…
primary cell
pancreatic beta cell
8
3
3
3
1
pancreatic ductal cell
6
3
3
3
1
2
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 13 more…
cell line
EndoC_BH1
8
1
8
3
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic acinar cell
1
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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