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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
19
target gene predictions
15
chromatin state
12
binding sites
7
accessible chromatin
5
histone modifications
1
variant allelic effects
Date released
28
September, 2022
14
February, 2021
6
November, 2021
4
June, 2020
3
October, 2022
2
May, 2021
1
August, 2017
1
February, 2024
Available data
45
bed bed3+
14
bed bed9
3
bigWig
Organism
59
Homo sapiens
Biosample type
33
primary cell
21
cell line
3
in vitro differentiated cells
2
tissue
Organ
849
epithelium
493
kidney
378
connective tissue
355
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
158
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
53
AMP
6
ENCODE
Genome assembly (visualization)
59
hg19
20
GRCh38
annotation_type!
candidate regulatory elements
representative DNase hypersensitivity sites
BIOSAMPLE
TYPE
59 results
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Clear Filters
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
variant allelic effects
primary cell
mammary gland epithelial cell
4
3
1
1
1
mammary epithelial cell
1
1
4
1
fibroblast of mammary gland
1
1
2
1
1
luminal epithelial cell of mammary gland
3
1
2
myoepithelial cell of mammary gland
2
2
cell line
MCF-7
6
5
3
1
2
T47D
2
2
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
tissue
mammary gland
1
1
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