Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
639
binding sites
580
histone modifications
399
target gene predictions
candidate regulatory elements
191
chromatin state
161
accessible chromatin
20
gene expression
10
differential activity
10
eQTL
4
variant allelic effects
Date released
1146
February, 2021
363
September, 2022
168
February, 2024
151
June, 2020
70
October, 2022
63
May, 2021
10
January, 2022
9
August, 2021
9
March, 2023
7
March, 2020
7
May, 2022
5
August, 2017
2
May, 2020
1
February, 2023
1
January, 2020
1
March, 2024
1
November, 2019
Available data
1788
bed bed3+
179
bed bed9
21
tsv
7
bed bed9+
3
bigWig
Organism
2014
Homo sapiens
Biosample type
2014
cell line
2004
primary cell
1649
tissue
389
in vitro differentiated cells
4
stem cell
Organ
162
bodily fluid
156
blood
103
embryo
62
lung
59
uterus
56
brain
43
skin of body
42
epithelium
41
lymph node
34
bone element
34
prostate gland
30
pancreas
27
kidney
26
connective tissue
24
intestine
24
large intestine
24
liver
21
mammary gland
11
musculature of body
vasculature
10
pituitary gland
9
heart
8
eye
8
penis
6
blood vessel
5
gonad
5
limb
5
lymphoid tissue
5
testis
4
artery
3
adipose tissue
3
spinal cord
2
extraembryonic component
2
lymphatic vessel
2
mouth
2
placenta
2
vein
Project
2005
AMP
9
community
Genome assembly (visualization)
1973
hg19
364
GRCh38
1
hg18
annotation_type!
candidate regulatory elements
organ_slims!
vasculature
BIOSAMPLE
TYPE
2014 results
search-icon
table-tab-icon
Clear Filters
binding sites
histone modifications
target gene predictions
chromatin state
accessible chromatin
gene expression
differential activity
eQTL
variant allelic effects
cell line
HeLa-S3
1
55
3
H1-hESC
2
1
39
1
1
8
A549
2
1
19
18
1
K562
2
1
23
7
1
EndoC_BH1
1
1
1
8
8
3
1
+ See 736 more…
See all biosamples
Download