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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
44
target gene predictions
10
accessible chromatin
6
binding sites
5
histone modifications
3
chromatin state
2
eQTL
2
gene expression
Date released
33
September, 2022
10
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
2
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
68
bed bed3+
bed bed9
3
bigWig
2
tsv
Organism
72
Homo sapiens
Biosample type
46
tissue
20
cell line
6
primary cell
Organ
799
epithelium
416
kidney
339
connective tissue
289
brain
240
pancreas
184
vasculature
158
musculature of body
146
bodily fluid
141
blood
139
heart
138
blood vessel
131
embryo
121
intestine
119
liver
110
lung
100
limb
95
skin of body
82
eye
72
large intestine
70
uterus
62
adipose tissue
57
artery
54
extraembryonic component
50
bone element
45
mammary gland
45
stomach
38
prostate gland
33
lymph node
31
adrenal gland
28
placenta
28
small intestine
26
penis
25
gonad
21
esophagus
20
ureter
19
spinal cord
18
thymus
15
lymphatic vessel
15
nerve
13
pituitary gland
13
spleen
13
testis
13
vein
11
ovary
11
skeleton
11
thyroid gland
10
bone marrow
10
bronchus
10
lymphoid tissue
7
mouth
6
breast
5
trachea
5
urinary bladder
4
tongue
4
vagina
2
nose
1
pericardium
Project
66
AMP
6
ENCODE
Genome assembly (visualization)
68
hg19
10
GRCh38
annotation_type!
candidate regulatory elements
files.file_type!
bed bed9
BIOSAMPLE
TYPE
72 results
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Clear Filters
target gene predictions
accessible chromatin
binding sites
histone modifications
chromatin state
eQTL
gene expression
tissue
large intestine
14
1
1
sigmoid colon
7
1
transverse colon
5
1
1
colonic mucosa
2
1
1
mucosa of rectum
2
1
+ See 6 more…
cell line
HT-29
2
1
1
1
HCT-116 cell
1
1
2
SW480
1
1
1
1
HCT116
3
RKO
1
1
1
+ See 1 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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