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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
44
target gene predictions
36
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
66
September, 2022
10
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
2
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
68
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
105
Homo sapiens
Biosample type
75
tissue
24
cell line
6
primary cell
Organ
835
epithelium
479
kidney
368
connective tissue
326
brain
249
pancreas
224
musculature of body
200
vasculature
180
lung
176
intestine
173
heart
171
bodily fluid
164
blood
158
embryo
154
blood vessel
143
limb
130
liver
129
skin of body
105
large intestine
89
eye
87
extraembryonic component
74
uterus
68
stomach
66
adipose tissue
64
bone element
61
artery
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
30
ureter
29
thymus
28
esophagus
26
spinal cord
19
spleen
18
nerve
17
lymphatic vessel
17
testis
15
lymphoid tissue
15
ovary
15
thyroid gland
15
vein
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
99
AMP
6
ENCODE
Genome assembly (visualization)
101
hg19
43
GRCh38
annotation_type!
candidate regulatory elements
month_released!
January, 2020
BIOSAMPLE
TYPE
105 results
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Clear Filters
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
14
13
1
1
sigmoid colon
7
5
1
transverse colon
5
4
1
1
colonic mucosa
2
3
1
mucosa of rectum
2
3
+ See 6 more…
cell line
HT-29
2
1
1
1
1
SW480
1
1
1
1
1
HCT-116 cell
1
1
2
HCT116
3
1
RKO
1
1
1
+ See 1 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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