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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
39
target gene predictions
36
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
66
September, 2022
10
February, 2021
7
June, 2020
6
November, 2021
May, 2021
3
August, 2017
2
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
63
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
100
Homo sapiens
Biosample type
72
tissue
22
cell line
6
primary cell
Organ
815
epithelium
493
kidney
362
connective tissue
344
brain
223
musculature of body
220
pancreas
213
vasculature
181
heart
176
lung
170
intestine
167
bodily fluid
162
blood vessel
160
blood
151
embryo
147
limb
130
liver
124
skin of body
100
large intestine
91
eye
84
extraembryonic component
72
uterus
67
adipose tissue
66
stomach
64
bone element
63
artery
57
mammary gland
49
prostate gland
46
small intestine
43
adrenal gland
43
placenta
40
lymph node
35
penis
33
ureter
32
gonad
28
esophagus
28
thymus
26
spinal cord
19
nerve
18
spleen
17
lymphatic vessel
17
testis
16
vein
15
lymphoid tissue
14
ovary
14
skeleton
14
thyroid gland
12
bronchus
11
bone marrow
11
mouth
7
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
94
AMP
6
ENCODE
Genome assembly (visualization)
96
hg19
43
GRCh38
annotation_type!
candidate regulatory elements
month_released!
May, 2021
BIOSAMPLE
TYPE
100 results
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Clear Filters
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
13
13
1
1
sigmoid colon
6
5
1
transverse colon
4
4
1
1
colonic mucosa
2
3
1
mucosa of rectum
2
3
+ See 6 more…
cell line
HT-29
1
1
1
1
1
SW480
1
1
1
1
1
HCT116
3
1
HCT-116 cell
1
2
RKO
1
1
1
+ See 1 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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