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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
44
target gene predictions
36
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
2
gene expression
Date released
66
September, 2022
10
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
2
February, 2024
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
68
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
103
Homo sapiens
Biosample type
73
tissue
24
cell line
6
primary cell
Organ
849
epithelium
492
kidney
374
connective tissue
337
brain
249
pancreas
228
musculature of body
213
vasculature
182
heart
179
lung
173
intestine
171
bodily fluid
164
blood
162
blood vessel
158
embryo
148
limb
132
liver
126
skin of body
103
large intestine
91
eye
86
extraembryonic component
73
uterus
67
adipose tissue
67
stomach
64
bone element
62
artery
59
mammary gland
50
prostate gland
46
small intestine
44
adrenal gland
43
placenta
41
lymph node
36
penis
33
ureter
30
gonad
29
thymus
26
spinal cord
25
esophagus
18
nerve
18
spleen
17
lymphatic vessel
17
vein
15
lymphoid tissue
15
testis
14
ovary
14
skeleton
14
thyroid gland
bronchus
12
pituitary gland
11
bone marrow
10
mouth
7
breast
7
urinary bladder
6
tongue
5
trachea
5
vagina
3
nose
1
pericardium
Project
97
AMP
6
ENCODE
Genome assembly (visualization)
101
hg19
41
GRCh38
annotation_type!
candidate regulatory elements
organ_slims!
bronchus
month_released!
January, 2022
BIOSAMPLE
TYPE
103 results
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Clear Filters
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
tissue
large intestine
14
13
1
1
sigmoid colon
7
5
1
transverse colon
5
4
1
colonic mucosa
2
3
1
mucosa of rectum
2
3
+ See 5 more…
cell line
HT-29
2
1
1
1
1
SW480
1
1
1
1
1
HCT-116 cell
1
1
2
HCT116
3
1
RKO
1
1
1
+ See 1 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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