Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
44
target gene predictions
36
chromatin state
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
66
September, 2022
10
February, 2021
5
May, 2021
3
August, 2017
3
November, 2021
2
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
58
bed bed3+
33
bed bed9
2
tsv
Organism
95
Homo sapiens
Biosample type
72
tissue
20
cell line
3
primary cell
Organ
637
epithelium
443
kidney
313
brain
connective tissue
202
musculature of body
188
pancreas
180
vasculature
165
lung
159
bodily fluid
159
heart
155
intestine
152
blood
146
embryo
139
blood vessel
130
limb
116
skin of body
109
liver
95
large intestine
78
extraembryonic component
71
uterus
63
adipose tissue
60
stomach
54
artery
52
mammary gland
49
bone element
46
prostate gland
44
small intestine
40
placenta
38
adrenal gland
33
lymph node
33
penis
32
eye
29
ureter
28
gonad
27
thymus
25
spinal cord
24
esophagus
17
spleen
16
nerve
15
testis
15
vein
13
lymphatic vessel
13
lymphoid tissue
13
ovary
13
pituitary gland
13
thyroid gland
10
mouth
9
bone marrow
9
bronchus
7
breast
6
skeleton
6
urinary bladder
6
vagina
5
tongue
4
trachea
2
nose
1
pericardium
Project
92
AMP
3
ENCODE
Genome assembly (visualization)
91
hg19
40
GRCh38
annotation_type!
candidate regulatory elements
accessible chromatin
organ_slims!
connective tissue
BIOSAMPLE
TYPE
95 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
chromatin state
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
14
13
1
sigmoid colon
7
5
transverse colon
5
4
1
colonic mucosa
2
3
1
mucosa of rectum
2
3
+ See 6 more…
cell line
HT-29
2
1
1
1
HCT116
3
1
SW480
1
1
1
1
HCT-116 cell
1
2
RKO
1
1
+ See 1 more…
primary cell
colon epithelial cell
3
See all biosamples
Download