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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
43
target gene predictions
36
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
66
September, 2022
10
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
2
February, 2024
2
January, 2022
2
March, 2024
March, 2020
1
October, 2022
Available data
67
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
104
Homo sapiens
Biosample type
74
tissue
24
cell line
6
primary cell
Organ
843
epithelium
490
kidney
connective tissue
317
brain
244
pancreas
220
musculature of body
204
vasculature
179
lung
174
intestine
171
bodily fluid
170
heart
164
blood
157
embryo
153
blood vessel
141
limb
129
skin of body
123
liver
104
large intestine
91
eye
87
extraembryonic component
74
uterus
67
stomach
64
bone element
62
adipose tissue
59
artery
59
mammary gland
51
prostate gland
46
small intestine
44
adrenal gland
44
placenta
41
lymph node
36
penis
33
ureter
32
gonad
28
thymus
27
esophagus
24
spinal cord
18
spleen
17
lymphatic vessel
17
testis
16
nerve
16
vein
15
lymphoid tissue
15
thyroid gland
14
ovary
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
6
tongue
6
urinary bladder
6
vagina
5
trachea
3
nose
1
pericardium
Project
98
AMP
6
ENCODE
Genome assembly (visualization)
100
hg19
43
GRCh38
annotation_type!
candidate regulatory elements
organ_slims!
connective tissue
month_released!
March, 2020
BIOSAMPLE
TYPE
104 results
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Clear Filters
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
14
13
1
1
sigmoid colon
6
5
1
transverse colon
5
4
1
1
colonic mucosa
2
3
1
mucosa of rectum
2
3
+ See 6 more…
cell line
HT-29
2
1
1
1
1
SW480
1
1
1
1
1
HCT-116 cell
1
1
2
HCT116
3
1
RKO
1
1
1
+ See 1 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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