Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
133
target gene predictions
candidate regulatory elements
100
accessible chromatin
76
binding sites
73
chromatin state
50
gene expression
49
histone modifications
21
eQTL
16
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
126
September, 2022
119
February, 2021
50
November, 2021
46
February, 2024
32
June, 2020
31
October, 2022
20
May, 2021
17
September, 2023
13
August, 2021
10
January, 2020
10
May, 2020
9
August, 2017
9
February, 2020
9
March, 2020
7
March, 2023
7
November, 2022
6
January, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
388
bed bed3+
64
bed bed9
64
tsv
55
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
542
Homo sapiens
Biosample type
237
primary cell
182
cell line
79
tissue
43
in vitro differentiated cells
1
stem cell
Organ
849
epithelium
493
kidney
378
connective tissue
355
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
158
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
468
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
470
hg19
173
GRCh38
2
hg18
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
542 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
accessible chromatin
binding sites
chromatin state
gene expression
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
10
10
1
osteoblast
2
5
3
1
2
2
fibroblast of lung
4
2
4
foreskin fibroblast
2
1
4
1
2
+ See 44 more…
cell line
K562
23
1
2
7
1
GM12878
8
1
2
2
1
GM19240
2
1
2
1
1
GM06990
1
1
2
1
1
GM19238
2
2
1
1
+ See 32 more…
tissue
adipose tissue
8
2
1
6
3
4
1
subcutaneous adipose tissue
2
1
5
6
1
1
3
omental fat pad
2
2
2
2
2
3
cartilage tissue
1
2
2
bone tissue
4
+ See 8 more…
in vitro differentiated cells
adipocyte
6
4
1
6
1
1
mesenchymal stem cell
3
1
1
2
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download