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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
260
gene expression
222
accessible chromatin
138
target gene predictions
candidate regulatory elements
93
differential activity
71
chromatin state
47
binding sites
47
variant allelic effects
31
histone modifications
9
Fine-mapped variants
9
eQTL
5
caQTL
Date released
155
September, 2023
153
February, 2021
127
November, 2021
127
September, 2022
77
February, 2024
38
March, 2023
36
May, 2021
27
June, 2020
24
August, 2021
22
May, 2020
21
January, 2020
20
January, 2021
17
March, 2020
16
February, 2023
15
November, 2022
13
February, 2020
7
April, 2020
7
October, 2019
7
October, 2022
6
August, 2018
4
November, 2019
3
August, 2017
3
January, 2022
3
March, 2024
2
May, 2022
1
July, 2020
1
May, 2019
Available data
489
bed bed3+
343
tsv
185
bigWig
78
txt
68
bed bed9
14
bigBed narrowPeak
8
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
932
Homo sapiens
Biosample type
746
primary cell
116
tissue
46
cell line
24
in vitro differentiated cells
Organ
849
epithelium
493
kidney
378
connective tissue
355
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
158
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
621
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
569
hg19
278
GRCh38
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
932 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
2
4
epithelial cell of proximal tubule
16
1
1
1
1
1
glomerular endothelial cell
14
2
1
1
1
pancreatic ductal cell
3
6
3
3
1
1
2
+ See 148 more…
tissue
pigmented layer of retina
20
coronary artery
1
3
3
3
2
3
2
1
tibial artery
1
3
2
3
2
3
2
ascending aorta
1
1
2
3
1
3
1
aorta
1
4
4
+ See 24 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
smooth muscle cell of the coronary artery
1
1
1
1
choroid plexus epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 7 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
pancreatic ductal cell
3
+ See 4 more…
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