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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
120
target gene predictions
107
accessible chromatin
89
chromatin state
67
gene expression
54
histone modifications
44
eQTL
41
Fine-mapped variants
33
differential activity
28
variant allelic effects
21
binding sites
2
sQTL
2
variant to gene
Date released
151
September, 2022
79
February, 2021
47
March, 2020
47
March, 2023
44
May, 2021
33
January, 2020
26
February, 2024
25
June, 2020
25
May, 2020
22
January, 2022
20
February, 2020
20
January, 2021
18
November, 2021
9
August, 2017
8
August, 2021
7
August, 2018
6
October, 2019
6
October, 2022
4
May, 2019
3
November, 2019
3
September, 2023
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
333
bed bed3+
143
tsv
79
bed bed9
78
bigWig
14
bigBed narrowPeak
8
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
607
Homo sapiens
Biosample type
362
tissue
152
primary cell
86
cell line
7
in vitro differentiated cells
1
stem cell
Organ
849
epithelium
493
kidney
378
connective tissue
355
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
158
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
568
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
474
hg19
213
GRCh38
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
608 results
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Clear Filters
target gene predictions
accessible chromatin
chromatin state
gene expression
histone modifications
eQTL
Fine-mapped variants
differential activity
variant allelic effects
binding sites
sQTL
variant to gene
tissue
brain
16
2
18
1
3
2
1
1
islet of Langerhans
1
6
3
11
1
13
2
1
2
2
2
caudate nucleus
3
2
4
1
1
2
3
1
pancreas
5
5
3
1
1
1
1
body of pancreas
5
4
2
1
3
1
+ See 66 more…
primary cell
pancreatic ductal cell
3
6
3
2
3
1
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 21 more…
cell line
EndoC_BH1
1
8
8
3
1
pituitary stalk
10
BE(2)-C
1
1
1
1
2
SK-N-DZ
2
1
2
1
SK-N-MC
1
1
1
1
2
+ See 14 more…
in vitro differentiated cells
pancreatic ductal cell
3
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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