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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
110
target gene predictions
96
accessible chromatin
75
chromatin state
51
gene expression
42
binding sites
34
histone modifications
22
eQTL
17
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
132
September, 2022
88
February, 2021
58
November, 2021
24
June, 2020
19
February, 2024
18
May, 2021
17
September, 2023
13
October, 2022
11
August, 2021
10
January, 2020
10
May, 2020
9
February, 2020
9
January, 2022
9
March, 2020
8
August, 2017
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
312
bed bed3+
67
bed bed9
65
tsv
59
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
471
Homo sapiens
Biosample type
268
primary cell
91
tissue
60
cell line
51
in vitro differentiated cells
1
stem cell
Organ
849
epithelium
493
kidney
378
connective tissue
355
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
158
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
389
AMP
58
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
395
hg19
159
GRCh38
2
hg18
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
471 results
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Clear Filters
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
10
10
1
osteoblast
2
5
1
2
3
2
keratinocyte
5
2
3
1
2
1
fibroblast of lung
4
4
2
+ See 49 more…
tissue
adipose tissue
8
2
6
3
1
4
1
subcutaneous adipose tissue
2
1
5
6
1
1
3
omental fat pad
2
2
2
2
2
3
cartilage tissue
1
2
2
skin of body
1
1
3
+ See 12 more…
cell line
GM23248
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
keratinocyte
3
1
RPMI7951
1
1
1
SK-MEL-5
1
1
1
+ See 22 more…
in vitro differentiated cells
adipocyte
6
4
6
1
1
1
mesenchymal stem cell
3
1
2
1
1
chondrocyte
5
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
+ See 11 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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