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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
278
gene expression
candidate regulatory elements
255
accessible chromatin
218
target gene predictions
154
chromatin state
92
differential activity
59
variant allelic effects
49
binding sites
36
histone modifications
18
Fine-mapped variants
14
eQTL
4
caQTL
Date released
267
September, 2022
167
February, 2021
155
September, 2023
132
November, 2021
81
February, 2024
41
May, 2021
38
March, 2023
36
June, 2020
36
May, 2020
33
January, 2020
31
August, 2021
30
March, 2020
25
February, 2020
20
January, 2021
15
February, 2023
15
November, 2022
7
April, 2020
7
October, 2019
6
April, 2019
6
August, 2018
6
November, 2019
6
October, 2022
5
January, 2022
3
August, 2017
3
March, 2024
3
May, 2019
2
May, 2022
1
July, 2020
Available data
625
bed bed3+
370
tsv
209
bigWig
146
bed bed9
78
txt
16
bigBed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1177
Homo sapiens
Biosample type
752
primary cell
344
tissue
56
cell line
25
in vitro differentiated cells
Organ
849
epithelium
493
kidney
380
connective tissue
355
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
158
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
861
AMP
155
KPMP
132
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
796
hg19
400
GRCh38
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
1177 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
chromatin state
differential activity
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
2
1
4
epithelial cell of proximal tubule
16
1
1
1
1
1
glomerular endothelial cell
14
2
1
1
1
pancreatic ductal cell
3
6
3
3
1
1
2
+ See 151 more…
tissue
heart
3
5
20
21
2
1
1
muscle of arm
1
16
16
1
muscle of leg
2
14
15
heart left ventricle
1
3
7
8
2
1
1
pigmented layer of retina
20
+ See 51 more…
cell line
EndoC_BH1
8
8
1
3
1
GM23248
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
keratinocyte
3
1
smooth muscle cell of the coronary artery
1
1
1
1
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
pancreatic ductal cell
3
+ See 5 more…
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