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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
125
target gene predictions
107
accessible chromatin
97
chromatin state
54
gene expression
32
binding sites
26
eQTL
26
histone modifications
24
variant allelic effects
15
Fine-mapped variants
14
differential activity
2
caQTL
2
pQTL
Date released
170
September, 2022
77
February, 2021
50
November, 2021
25
June, 2020
20
May, 2020
18
February, 2024
18
March, 2020
18
May, 2021
17
January, 2020
17
September, 2023
15
February, 2020
12
October, 2022
11
August, 2021
8
January, 2022
7
August, 2017
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2019
2
May, 2024
2
November, 2019
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
326
bed bed3+
90
bed bed9
82
tsv
69
bigWig
7
txt
6
bigBed bed9
1
bigBed narrowPeak
Organism
524
Homo sapiens
Biosample type
234
primary cell
220
tissue
43
in vitro differentiated cells
26
cell line
1
stem cell
Organ
849
epithelium
493
kidney
380
connective tissue
355
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
158
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
448
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
444
hg19
199
GRCh38
2
hg18
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
524 results
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Clear Filters
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
eQTL
histone modifications
variant allelic effects
Fine-mapped variants
differential activity
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
10
10
1
osteoblast
2
5
1
2
3
2
fibroblast of lung
4
4
2
foreskin fibroblast
2
1
1
4
2
+ See 43 more…
tissue
muscle of arm
16
1
16
1
muscle of leg
14
2
15
adipose tissue
8
2
6
3
1
4
1
subcutaneous adipose tissue
2
1
5
6
1
3
1
tibial nerve
3
3
4
2
2
2
3
+ See 28 more…
in vitro differentiated cells
adipocyte
6
4
6
1
1
1
mesenchymal stem cell
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
1
1
adipose tissue derived mesenchymal stem cell
1
1
chondrocyte
1
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
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