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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
74
target gene predictions
60
chromatin state
18
accessible chromatin
6
binding sites
6
histone modifications
4
gene expression
3
eQTL
2
variant allelic effects
Date released
112
September, 2022
15
November, 2021
11
February, 2021
10
June, 2020
7
May, 2021
4
August, 2017
4
February, 2024
4
March, 2024
3
January, 2022
2
March, 2020
1
October, 2022
Available data
110
bed bed3+
56
bed bed9
8
bigWig
4
tsv
Organism
173
Homo sapiens
Biosample type
132
tissue
24
cell line
17
primary cell
Organ
849
epithelium
493
kidney
378
connective tissue
355
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
158
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
158
AMP
15
ENCODE
Genome assembly (visualization)
166
hg19
76
GRCh38
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
173 results
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Clear Filters
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
eQTL
variant allelic effects
tissue
stomach
21
19
3
1
1
1
large intestine
14
13
1
1
sigmoid colon
7
5
1
transverse colon
5
4
1
1
colonic mucosa
2
3
1
+ See 12 more…
cell line
HT-29
2
1
1
1
1
SW480
1
1
1
1
1
HCT-116 cell
1
1
2
HCT116
3
1
RKO
1
1
1
+ See 1 more…
primary cell
colon epithelial cell
3
3
parietal cell
1
1
1
peptic cell
1
1
1
foveolar cell of stomach
1
1
stomach neuroendocrine cell
1
1
+ See 1 more…
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