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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1669
candidate regulatory elements
1183
target gene predictions
977
histone modifications
chromatin state
864
accessible chromatin
811
binding sites
579
gene expression
162
differential activity
162
eQTL
84
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2590
February, 2021
1678
September, 2022
384
May, 2021
333
November, 2021
289
June, 2020
286
September, 2023
152
May, 2020
128
August, 2021
128
March, 2020
106
January, 2022
101
October, 2022
83
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
44
November, 2022
32
February, 2023
19
April, 2020
15
May, 2022
13
November, 2019
9
August, 2018
9
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5531
bed bed3+
799
tsv
505
bigWig
108
txt
4
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
6554
Homo sapiens
Biosample type
2119
primary cell
2092
tissue
1992
cell line
394
in vitro differentiated cells
3
stem cell
Organ
818
epithelium
572
kidney
392
brain
392
connective tissue
284
musculature of body
238
lung
235
pancreas
221
intestine
215
vasculature
204
heart
193
limb
166
skin of body
162
bodily fluid
160
blood vessel
153
blood
136
embryo
133
large intestine
113
extraembryonic component
110
liver
99
eye
91
stomach
77
adipose tissue
74
bone element
71
mammary gland
67
artery
64
small intestine
63
prostate gland
57
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
40
gonad
38
thymus
35
spinal cord
34
esophagus
27
spleen
26
uterus
21
nerve
21
testis
19
lymphatic vessel
18
ovary
17
lymphoid tissue
17
thyroid gland
17
vein
15
skeleton
14
mouth
13
bronchus
12
pituitary gland
11
bone marrow
10
breast
7
tongue
7
urinary bladder
7
vagina
5
trachea
3
nose
1
pericardium
Project
5896
AMP
333
ENCODE
281
KPMP
59
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
5718
hg19
791
GRCh38
4
hg18
annotation_type!
chromatin state
BIOSAMPLE
TYPE
6602 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
2
86
18
1
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
14
2
8
2
B cell
13
10
6
2
+ See 433 more…
tissue
heart
37
20
1
5
1
3
2
stomach
40
21
1
3
1
kidney
29
14
2
10
1
7
1
1
brain
29
16
3
2
1
1
2
1
lung
33
17
1
+ See 229 more…
cell line
A549
21
19
1
1
2
EndoC_BH1
1
1
8
1
8
3
1
MCF-7
9
6
2
1
3
breast cancer cell
11
9
K562
7
7
1
1
2
+ See 756 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
3
1
1
cardiomyocytes
11
embryonic stem cell
1
1
6
1
+ See 116 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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