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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1629
candidate regulatory elements
1304
target gene predictions
967
histone modifications
chromatin state
806
binding sites
789
accessible chromatin
634
gene expression
155
eQTL
134
differential activity
127
variant allelic effects
69
Fine-mapped variants
13
caQTL
5
hQTL
3
meQTL
3
other
3
pQTL
3
sQTL
2
variant to gene
1
representative DNase hypersensitivity sites
Date released
2542
February, 2021
1629
September, 2022
351
May, 2021
347
February, 2024
311
November, 2021
286
September, 2023
279
June, 2020
144
May, 2020
120
August, 2021
119
March, 2020
102
January, 2022
99
October, 2022
77
January, 2020
60
February, 2020
36
January, 2021
30
March, 2024
23
March, 2023
22
November, 2022
19
April, 2020
15
May, 2022
11
November, 2019
7
February, 2023
3
November, 2020
3
October, 2019
3
September, 2018
2
August, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
January, 2018
1
July, 2020
Available data
5630
bed bed3+
822
tsv
451
bigWig
108
txt
21
csv
2
bigBed narrowPeak
Organism
6599
Homo sapiens
Biosample type
2128
primary cell
2121
cell line
1976
tissue
417
in vitro differentiated cells
3
stem cell
Organ
896
epithelium
575
kidney
412
connective tissue
394
brain
301
musculature of body
pancreas
240
lung
233
vasculature
230
intestine
204
heart
194
limb
191
bodily fluid
187
embryo
182
blood
176
blood vessel
169
skin of body
139
liver
138
large intestine
113
extraembryonic component
eye
95
stomach
79
adipose tissue
79
uterus
74
bone element
72
mammary gland
67
artery
65
prostate gland
64
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
18
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
5982
AMP
311
ENCODE
281
KPMP
40
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
5753
hg19
947
GRCh38
4
hg18
annotation_type!
chromatin state
organ_slims!
eye
pancreas
BIOSAMPLE
TYPE
6647 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
hQTL
meQTL
other
pQTL
sQTL
variant to gene
representative DNase hypersensitivity sites
primary cell
monocyte
2
86
1
18
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
2
15
9
1
2
2
B cell
14
10
6
2
+ See 422 more…
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
2
1
8
A549
21
19
1
2
1
K562
7
23
1
2
1
MCF-7
9
6
2
3
1
+ See 756 more…
tissue
heart
37
20
1
1
5
3
2
stomach
40
21
1
3
1
1
kidney
29
14
2
1
10
7
1
1
brain
29
16
3
1
2
1
2
1
lung
33
17
1
1
+ See 245 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
1
4
1
cardiomyocytes
11
embryonic stem cell
1
1
1
6
+ See 119 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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