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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1648
candidate regulatory elements
1336
target gene predictions
963
histone modifications
chromatin state
889
accessible chromatin
804
binding sites
gene expression
163
differential activity
163
eQTL
136
variant allelic effects
71
Fine-mapped variants
12
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
representative DNase hypersensitivity sites
Date released
2390
February, 2021
1646
September, 2022
328
November, 2021
291
May, 2021
284
June, 2020
282
February, 2024
149
May, 2020
115
September, 2023
111
March, 2020
105
January, 2022
100
October, 2022
69
August, 2021
64
January, 2020
56
January, 2021
54
March, 2023
44
November, 2022
32
February, 2023
25
February, 2020
19
April, 2020
13
May, 2022
12
November, 2019
9
October, 2019
2
May, 2024
2
November, 2020
2
September, 2018
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5784
bed bed3+
521
bigWig
251
tsv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
6160
Homo sapiens
Biosample type
2116
cell line
1985
tissue
1754
primary cell
348
in vitro differentiated cells
3
stem cell
Organ
643
epithelium
375
brain
373
kidney
363
connective tissue
290
musculature of body
239
lung
227
intestine
212
pancreas
197
vasculature
190
bodily fluid
189
limb
183
heart
181
blood
177
embryo
167
skin of body
151
blood vessel
136
large intestine
liver
113
extraembryonic component
99
eye
93
stomach
77
uterus
72
mammary gland
70
bone element
66
adipose tissue
64
prostate gland
64
small intestine
59
artery
58
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
40
gonad
38
thymus
36
esophagus
34
spinal cord
27
spleen
21
testis
19
nerve
18
lymphoid tissue
18
ovary
18
thyroid gland
17
vein
16
lymphatic vessel
15
skeleton
14
bronchus
14
mouth
12
pituitary gland
11
bone marrow
10
breast
7
tongue
7
urinary bladder
7
vagina
5
trachea
3
nose
Project
5675
AMP
328
ENCODE
110
KPMP
60
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
5901
hg19
956
GRCh38
2
hg18
annotation_type!
chromatin state
gene expression
representative DNase hypersensitivity sites
organ_slims!
liver
BIOSAMPLE
TYPE
6208 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
MCF-7
9
6
2
1
3
+ See 756 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
1
kidney
29
14
2
10
1
1
1
brain
29
16
3
2
1
2
1
lung
33
17
1
+ See 232 more…
primary cell
monocyte
2
86
18
1
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
15
2
1
2
2
+ See 393 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
embryonic stem cell
1
1
6
1
mesenchymal stem cell
3
3
1
1
1
+ See 105 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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