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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1218
target gene predictions
977
histone modifications
chromatin state
817
binding sites
643
accessible chromatin
512
gene expression
eQTL
139
variant allelic effects
74
Fine-mapped variants
48
differential activity
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
representative DNase hypersensitivity sites
Date released
2586
February, 2021
1678
September, 2022
381
May, 2021
365
February, 2024
289
June, 2020
152
May, 2020
128
March, 2020
99
August, 2021
99
October, 2022
83
January, 2020
60
March, 2023
44
November, 2022
38
February, 2020
31
February, 2023
30
March, 2024
15
May, 2022
13
November, 2019
9
August, 2018
9
October, 2019
5
January, 2022
5
September, 2023
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5460
bed bed3+
591
tsv
275
bigWig
108
txt
24
csv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
6085
Homo sapiens
Biosample type
2142
cell line
2024
tissue
1536
primary cell
425
in vitro differentiated cells
3
stem cell
Organ
582
epithelium
428
kidney
365
brain
319
connective tissue
283
musculature of body
227
lung
208
intestine
205
pancreas
189
bodily fluid
189
limb
188
heart
185
embryo
183
vasculature
180
blood
156
skin of body
145
blood vessel
130
large intestine
126
liver
109
extraembryonic component
95
eye
85
stomach
76
uterus
71
bone element
66
adipose tissue
66
mammary gland
64
prostate gland
59
small intestine
57
artery
54
lymph node
54
penis
54
placenta
51
ureter
48
adrenal gland
37
gonad
37
thymus
33
spinal cord
31
esophagus
27
spleen
20
testis
19
lymphoid tissue
19
nerve
18
vein
16
ovary
16
thyroid gland
15
skeleton
14
mouth
12
pituitary gland
11
bronchus
10
breast
10
lymphatic vessel
8
bone marrow
8
tongue
8
urinary bladder
7
vagina
5
trachea
3
nose
1
pericardium
Project
6131
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
9
community
2
ITG
Genome assembly (visualization)
5545
hg19
540
GRCh38
1
hg18
annotation_type!
chromatin state
representative DNase hypersensitivity sites
eQTL
BIOSAMPLE
TYPE
6131 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
gene expression
variant allelic effects
Fine-mapped variants
differential activity
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
2
1
8
A549
21
19
1
2
1
K562
7
23
1
2
1
EndoC_BH1
1
1
1
8
8
1
1
+ See 763 more…
tissue
heart
37
20
1
1
5
3
2
stomach
40
21
1
3
1
kidney
29
14
2
1
10
7
1
brain
29
16
3
1
2
1
1
lung
33
17
1
+ See 250 more…
primary cell
monocyte
1
86
1
17
15
2
1
1
CD8-positive, alpha-beta T cell
7
3
30
2
3
common myeloid progenitor, CD34-positive
27
14
hepatocyte
1
2
4
1
7
13
2
B cell
14
10
2
2
+ See 310 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
1
4
1
cardiomyocytes
11
embryonic stem cell
1
1
1
6
+ See 121 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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