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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1218
target gene predictions
histone modifications
chromatin state
817
binding sites
643
accessible chromatin
512
gene expression
166
eQTL
139
variant allelic effects
74
Fine-mapped variants
48
differential activity
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Date released
1750
February, 2021
1672
September, 2022
372
February, 2024
289
June, 2020
270
May, 2021
152
May, 2020
128
March, 2020
106
August, 2021
106
January, 2022
99
October, 2022
83
January, 2020
64
February, 2020
61
March, 2023
44
November, 2022
31
February, 2023
30
March, 2024
15
May, 2022
13
November, 2019
9
August, 2018
9
October, 2019
5
September, 2023
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
4494
bed bed3+
617
tsv
275
bigWig
108
txt
24
csv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
5274
Homo sapiens
Biosample type
2047
tissue
1568
cell line
1370
primary cell
332
in vitro differentiated cells
3
stem cell
Organ
557
epithelium
426
kidney
346
brain
311
connective tissue
283
musculature of body
224
lung
214
pancreas
203
intestine
192
limb
188
heart
181
vasculature
174
embryo
166
bodily fluid
158
blood
146
skin of body
145
blood vessel
127
large intestine
120
liver
105
extraembryonic component
92
eye
85
stomach
78
adipose tissue
75
uterus
65
bone element
61
mammary gland
60
small intestine
58
prostate gland
57
artery
52
placenta
51
ureter
50
lymph node
49
adrenal gland
49
penis
39
gonad
36
thymus
35
spinal cord
34
esophagus
28
spleen
21
nerve
21
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
mouth
15
skeleton
12
pituitary gland
11
breast
10
bronchus
9
lymphatic vessel
8
tongue
8
urinary bladder
8
vagina
6
bone marrow
3
nose
3
trachea
1
pericardium
Project
5321
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
4629
hg19
561
GRCh38
4
hg18
annotation_type!
chromatin state
histone modifications
BIOSAMPLE
TYPE
5321 results
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Clear Filters
candidate regulatory elements
target gene predictions
binding sites
accessible chromatin
gene expression
eQTL
variant allelic effects
Fine-mapped variants
differential activity
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
tissue
heart
37
20
1
5
3
2
stomach
40
21
3
1
1
kidney
29
14
1
10
7
1
1
brain
29
16
1
2
1
2
1
lung
33
17
1
1
+ See 218 more…
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
2
1
8
A549
21
19
2
1
K562
7
23
2
1
EndoC_BH1
1
1
8
8
1
1
+ See 643 more…
primary cell
monocyte
1
1
17
15
4
2
1
1
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
2
2
CD14-positive monocyte
8
19
hepatocyte
1
2
1
7
13
2
+ See 296 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
1
1
1
neural progenitor cell
5
5
10
7
adipocyte
4
6
1
4
1
cardiomyocytes
11
extended pluripotent stem (EPS) cells
9
+ See 97 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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