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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1354
target gene predictions
977
histone modifications
chromatin state
817
binding sites
674
gene expression
382
accessible chromatin
169
eQTL
167
differential activity
136
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2576
February, 2021
1671
September, 2022
371
May, 2021
335
February, 2024
289
June, 2020
286
September, 2023
128
March, 2020
111
November, 2021
108
August, 2021
102
January, 2022
101
October, 2022
99
May, 2020
70
March, 2023
64
February, 2020
33
November, 2022
30
March, 2024
28
January, 2021
18
January, 2020
13
February, 2023
9
August, 2018
8
May, 2022
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
November, 2019
1
November, 2020
Available data
5883
bed bed3+
898
tsv
bigWig
108
txt
24
csv
16
bigBed narrowPeak
bam
3
bed gappedPeak
3
xls
Organism
6454
Homo sapiens
Biosample type
2157
cell line
2023
tissue
1859
primary cell
414
in vitro differentiated cells
3
stem cell
Organ
717
epithelium
540
kidney
373
brain
355
connective tissue
285
musculature of body
231
lung
219
intestine
203
vasculature
200
pancreas
191
bodily fluid
185
embryo
183
heart
182
blood
180
limb
164
skin of body
154
blood vessel
135
large intestine
116
liver
110
extraembryonic component
90
stomach
78
uterus
74
adipose tissue
69
mammary gland
65
prostate gland
64
bone element
64
eye
62
small intestine
59
artery
55
placenta
54
lymph node
54
penis
53
adrenal gland
48
ureter
41
gonad
37
thymus
36
esophagus
35
spinal cord
27
spleen
22
testis
19
lymphoid tissue
19
nerve
18
ovary
18
thyroid gland
17
vein
16
lymphatic vessel
15
mouth
13
pituitary gland
12
bronchus
11
breast
9
bone marrow
8
tongue
8
urinary bladder
8
vagina
7
skeleton
5
trachea
3
nose
1
pericardium
Project
6020
AMP
281
KPMP
111
ENCODE
32
T1D
9
community
5
ITG
Genome assembly (visualization)
5482
hg19
622
GRCh38
4
hg18
annotation_type!
chromatin state
files.file_type!
bam
bigWig
BIOSAMPLE
TYPE
6458 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
gene expression
accessible chromatin
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
2
8
1
A549
21
19
1
2
1
K562
7
23
1
2
1
EndoC_BH1
1
1
1
8
7
3
1
+ See 764 more…
tissue
stomach
40
21
1
1
3
1
heart
37
20
1
1
3
2
2
kidney
29
14
2
1
7
1
1
1
brain
29
16
3
1
1
1
2
1
lung
33
17
1
1
+ See 241 more…
primary cell
monocyte
2
86
1
15
2
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
3
common myeloid progenitor, CD34-positive
27
14
CD14-positive monocyte
8
19
B cell
14
10
2
+ See 407 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
7
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
1
1
3
cardiomyocytes
11
embryonic stem cell
1
1
1
6
+ See 120 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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