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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1455
candidate regulatory elements
1198
target gene predictions
960
histone modifications
851
accessible chromatin
chromatin state
797
binding sites
471
gene expression
165
eQTL
124
variant allelic effects
111
differential activity
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2349
February, 2021
1474
September, 2022
377
May, 2021
328
November, 2021
321
February, 2024
264
June, 2020
146
September, 2023
133
May, 2020
124
March, 2020
105
January, 2022
98
October, 2022
92
August, 2021
70
March, 2023
69
January, 2020
56
January, 2021
55
February, 2020
44
November, 2022
32
February, 2023
28
March, 2024
19
April, 2020
15
May, 2022
13
November, 2019
9
August, 2018
9
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5397
bed bed3+
637
tsv
507
bigWig
24
csv
21
txt
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
6195
Homo sapiens
Biosample type
2010
cell line
1954
primary cell
1873
tissue
401
in vitro differentiated cells
3
stem cell
Organ
896
epithelium
kidney
410
connective tissue
394
brain
301
musculature of body
260
pancreas
240
lung
233
vasculature
230
intestine
204
heart
194
limb
191
bodily fluid
embryo
182
blood
176
blood vessel
169
skin of body
139
liver
138
large intestine
113
extraembryonic component
100
eye
95
stomach
79
adipose tissue
79
uterus
74
bone element
72
mammary gland
67
artery
65
prostate gland
64
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
18
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
5681
AMP
328
ENCODE
141
KPMP
60
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
5533
hg19
921
GRCh38
4
hg18
annotation_type!
chromatin state
organ_slims!
embryo
kidney
BIOSAMPLE
TYPE
6243 results
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table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
K562
7
23
1
1
2
EndoC_BH1
1
1
8
1
8
1
3
MCF-7
9
6
2
1
3
+ See 733 more…
primary cell
monocyte
2
86
18
1
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
2
9
1
2
2
B cell
14
10
6
2
+ See 372 more…
tissue
heart
37
20
1
5
1
3
2
stomach
40
21
1
3
1
1
brain
29
16
3
2
1
1
2
1
lung
33
17
1
1
muscle of arm
33
16
1
1
+ See 234 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
4
1
1
cardiomyocytes
11
embryonic stem cell
1
1
6
1
+ See 112 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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