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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1591
candidate regulatory elements
1252
target gene predictions
952
histone modifications
chromatin state
877
accessible chromatin
791
binding sites
649
gene expression
163
differential activity
161
eQTL
136
variant allelic effects
71
Fine-mapped variants
12
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2511
February, 2021
1592
September, 2022
374
May, 2021
326
November, 2021
293
February, 2024
286
September, 2023
274
June, 2020
149
May, 2020
117
March, 2020
110
August, 2021
105
January, 2022
99
October, 2022
80
January, 2020
66
March, 2023
62
February, 2020
56
January, 2021
44
November, 2022
32
February, 2023
30
March, 2024
19
April, 2020
13
May, 2022
12
November, 2019
9
August, 2018
9
October, 2019
3
November, 2020
2
January, 2018
2
September, 2018
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5607
bed bed3+
860
tsv
519
bigWig
108
txt
21
csv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
6631
Homo sapiens
Biosample type
2193
primary cell
2065
tissue
2020
cell line
396
in vitro differentiated cells
3
stem cell
Organ
896
epithelium
575
kidney
410
connective tissue
394
brain
301
musculature of body
260
pancreas
240
lung
233
vasculature
230
intestine
204
heart
194
limb
191
bodily fluid
embryo
182
blood
176
blood vessel
169
skin of body
liver
138
large intestine
113
extraembryonic component
100
eye
95
stomach
79
adipose tissue
79
uterus
74
bone element
72
mammary gland
67
artery
65
prostate gland
64
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
18
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
5979
AMP
326
ENCODE
281
KPMP
60
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
5736
hg19
903
GRCh38
2
hg18
annotation_type!
chromatin state
organ_slims!
embryo
liver
BIOSAMPLE
TYPE
6679 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
2
86
18
1
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
2
9
1
2
2
B cell
14
10
6
2
+ See 436 more…
tissue
heart
37
20
1
5
1
3
2
stomach
40
21
1
3
1
1
kidney
29
14
2
10
1
7
1
1
brain
29
16
3
2
1
1
2
1
lung
33
17
1
1
+ See 252 more…
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
K562
7
23
1
1
2
EndoC_BH1
1
1
8
1
8
3
1
MCF-7
9
6
2
1
3
+ See 741 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
4
1
1
cardiomyocytes
11
embryonic stem cell
1
1
6
1
+ See 111 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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