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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1614
candidate regulatory elements
1323
target gene predictions
974
histone modifications
chromatin state
895
accessible chromatin
813
binding sites
122
variant allelic effects
72
Fine-mapped variants
63
eQTL
12
gene expression
6
caQTL
5
hQTL
3
meQTL
3
pQTL
3
sQTL
2
other
2
variant to gene
Date released
2376
February, 2021
1628
September, 2022
324
November, 2021
300
February, 2024
290
May, 2021
284
June, 2020
134
May, 2020
115
March, 2020
98
October, 2022
74
August, 2021
66
January, 2020
56
January, 2021
41
November, 2022
26
February, 2023
25
February, 2020
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5767
bed bed3+
529
bigWig
96
tsv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
5865
Homo sapiens
Biosample type
2117
cell line
1866
tissue
1581
primary cell
343
in vitro differentiated cells
3
stem cell
Organ
547
epithelium
351
brain
339
connective tissue
310
kidney
293
musculature of body
238
lung
224
intestine
190
bodily fluid
187
limb
181
blood
178
heart
177
embryo
171
vasculature
169
pancreas
164
skin of body
134
large intestine
131
blood vessel
112
extraembryonic component
107
liver
98
eye
stomach
76
uterus
72
mammary gland
70
bone element
63
prostate gland
63
small intestine
59
adipose tissue
57
adrenal gland
56
placenta
54
lymph node
54
penis
52
artery
51
ureter
38
thymus
37
gonad
33
esophagus
33
spinal cord
26
spleen
19
testis
18
lymphoid tissue
18
nerve
17
ovary
17
thyroid gland
vein
15
skeleton
14
bronchus
14
lymphatic vessel
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5506
AMP
324
ENCODE
58
T1D
19
LungMap
5
ITG
Genome assembly (visualization)
5912
hg19
991
GRCh38
4
hg18
annotation_type!
chromatin state
organ_slims!
stomach
vein
BIOSAMPLE
TYPE
5912 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
Fine-mapped variants
eQTL
gene expression
caQTL
hQTL
meQTL
pQTL
sQTL
other
variant to gene
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
MCF-7
9
6
2
1
3
+ See 758 more…
tissue
heart
37
20
1
5
1
2
kidney
29
14
2
10
1
1
1
brain
29
16
3
2
1
1
muscle of arm
33
16
1
1
lung
33
17
+ See 218 more…
primary cell
monocyte
2
86
18
1
1
2
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
15
2
2
1
1
1
+ See 323 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 103 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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