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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
272
gene expression
251
accessible chromatin
207
candidate regulatory elements
196
target gene predictions
chromatin state
92
differential activity
75
histone modifications
57
binding sites
56
variant allelic effects
36
Fine-mapped variants
32
eQTL
2
caQTL
Date released
302
February, 2021
219
September, 2022
158
September, 2023
127
November, 2021
77
February, 2024
45
June, 2020
45
May, 2021
44
March, 2020
38
January, 2020
38
March, 2023
32
May, 2020
27
February, 2020
23
August, 2021
20
January, 2021
18
January, 2022
15
November, 2022
12
February, 2023
11
October, 2022
7
April, 2020
6
August, 2018
5
October, 2019
3
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
833
bed bed3+
391
tsv
195
bigWig
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1275
Homo sapiens
Biosample type
792
primary cell
349
tissue
105
cell line
29
in vitro differentiated cells
1
stem cell
Organ
896
epithelium
575
kidney
412
connective tissue
394
brain
301
musculature of body
260
pancreas
240
lung
233
vasculature
230
intestine
204
heart
194
limb
191
bodily fluid
187
embryo
182
blood
176
blood vessel
169
skin of body
139
liver
138
large intestine
113
extraembryonic component
100
eye
95
stomach
79
adipose tissue
79
uterus
74
bone element
72
mammary gland
67
artery
65
prostate gland
64
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
18
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
965
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
884
hg19
268
GRCh38
annotation_type!
chromatin state
BIOSAMPLE
TYPE
1276 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
histone modifications
binding sites
variant allelic effects
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
9
15
7
1
2
2
1
2
hepatocyte
13
8
1
3
4
1
2
epithelial cell of proximal tubule
16
1
2
1
1
1
glomerular endothelial cell
14
2
2
1
1
pancreatic ductal cell
3
6
3
3
2
1
1
+ See 152 more…
tissue
brain
1
2
29
16
3
1
1
2
pigmented layer of retina
20
caudate nucleus
1
2
5
3
1
1
3
2
substantia nigra
1
5
2
1
3
3
cerebellum
2
1
3
2
1
3
2
+ See 75 more…
cell line
EndoC_BH1
8
8
1
3
1
pituitary stalk
10
SK-N-DZ
1
4
2
1
SK-N-SH
4
3
1
SK-N-MC
1
2
1
1
2
+ See 19 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte
2
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 7 more…
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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