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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
16
target gene predictions
15
accessible chromatin
10
candidate regulatory elements
5
binding sites
chromatin state
4
histone modifications
3
variant allelic effects
1
gene expression
Date released
19
November, 2021
14
February, 2021
8
September, 2022
5
February, 2024
4
June, 2020
2
May, 2021
1
February, 2020
1
October, 2022
Available data
53
bed bed3+
11
bigWig
Organism
54
Homo sapiens
Biosample type
tissue
30
cell line
24
primary cell
Organ
839
epithelium
335
kidney
327
connective tissue
187
bodily fluid
179
blood
165
vasculature
160
pancreas
159
embryo
147
skin of body
108
blood vessel
102
brain
102
lung
91
liver
70
mammary gland
67
uterus
63
musculature of body
55
bone element
54
lymph node
53
intestine
52
penis
52
prostate gland
38
extraembryonic component
38
heart
36
large intestine
35
eye
31
artery
19
lymphatic vessel
17
vein
14
bronchus
11
adrenal gland
11
bone marrow
11
placenta
11
stomach
10
gonad
10
pituitary gland
9
esophagus
7
limb
7
testis
6
mouth
6
spinal cord
5
adipose tissue
5
lymphoid tissue
5
trachea
4
small intestine
3
nose
3
thyroid gland
2
ovary
1
pericardium
1
thymus
Project
35
AMP
19
ENCODE
Genome assembly (visualization)
53
hg19
21
GRCh38
annotation_type!
chromatin state
biosample_type!
tissue
BIOSAMPLE
TYPE
54 results
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Clear Filters
target gene predictions
accessible chromatin
candidate regulatory elements
binding sites
histone modifications
variant allelic effects
gene expression
cell line
HT-29
2
1
2
1
1
SW480
1
1
2
1
1
HCT116
3
2
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
enterocyte
3
3
enteric smooth muscle cell
2
2
enterocyte of epithelium of small intestine
1
1
paneth cell
1
1
+ See 3 more…
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