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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
164
candidate regulatory elements
103
target gene predictions
chromatin state
29
accessible chromatin
9
histone modifications
6
binding sites
5
gene expression
5
variant allelic effects
4
eQTL
Date released
155
September, 2022
100
February, 2021
28
November, 2021
13
June, 2020
8
February, 2024
8
May, 2021
5
March, 2024
4
January, 2022
3
March, 2020
1
October, 2022
Available data
316
bed bed3+
16
bigWig
5
tsv
Organism
325
Homo sapiens
Biosample type
261
tissue
34
primary cell
30
cell line
Organ
896
epithelium
575
kidney
412
connective tissue
394
brain
301
musculature of body
260
pancreas
240
lung
233
vasculature
230
intestine
204
heart
194
limb
191
bodily fluid
187
embryo
182
blood
176
blood vessel
169
skin of body
139
liver
138
large intestine
113
extraembryonic component
100
eye
95
stomach
79
adipose tissue
79
uterus
74
bone element
72
mammary gland
67
artery
65
prostate gland
64
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
18
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
297
AMP
28
ENCODE
Genome assembly (visualization)
316
hg19
34
GRCh38
annotation_type!
chromatin state
BIOSAMPLE
TYPE
325 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
histone modifications
binding sites
gene expression
variant allelic effects
eQTL
tissue
stomach
40
21
3
1
1
1
small intestine
29
17
1
1
large intestine
27
14
1
1
sigmoid colon
10
7
1
transverse colon
8
5
1
1
+ See 21 more…
primary cell
colon epithelial cell
3
3
enterocyte
3
3
enteric smooth muscle cell
2
2
parietal cell
1
1
1
peptic cell
1
1
1
+ See 7 more…
cell line
HT-29
2
2
1
1
1
SW480
2
1
1
1
1
HCT116
2
3
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
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